DRSC/TRiP Functional Genomics Resources

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Protein Alignment C32D5.11 and Topors

DIOPT Version :9

Sequence 1:NP_001364718.1 Gene:C32D5.11 / 174052 WormBaseID:WBGene00016318 Length:728 Species:Caenorhabditis elegans
Sequence 2:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster


Alignment Length:900 Identity:174/900 - (19%)
Similarity:297/900 - (33%) Gaps:308/900 - (34%)


- Green bases have known domain annotations that are detailed below.


 Worm     2 GDS-GVEPV---------IPSPSTSS-----NNPVEE----LQCTICLSTRFSQECRIEGCNHSF 47
            ||: ..|||         |..|.||:     |..||.    ..|.|||| |..::|..:.|.|.|
  Fly    59 GDNEAEEPVSAGPDNANAIGEPGTSASAAEENGTVERNSPPPNCAICLS-RCRRKCFTDSCMHQF 122

 Worm    48 CFSCISEWVCQSLRPSCPMCRKDVDKV--------SYDFSEQKLGQKEIAIKEYRSGHMSLTPTD 104
            ||.|:.||  ..::|.||:|::....:        .||              .|.....|..||:
  Fly   123 CFKCLCEW--SKIKPECPLCKQPFRTIIHNVRTLDDYD--------------RYPVQTTSPVPTE 171

 Worm   105 RVQL------------LSERRLVVRNLMHSYKVVG------LLSSEISGIEESKEPDEILKNALI 151
            ...|            |.:.:.|:.|.:.:....|      |.::|::....|....|..::.|:
  Fly   172 NPSLRYHIVRRPRYTPLVQNQAVIVNDIEAAIAAGAAGEDVLSAAEVAAGRRSYSRFEPYRSELM 236

 Worm   152 ELAAIVTQHIQKAEI--SLSDLRTEQARINKSIVFNTVTFRRMVYTSKVKVMYPDLKKVKIKPSD 214
            .    ..||.|.|..  |||.|                 :||.||..|   :|            
  Fly   237 N----YYQHDQDASTSGSLSQL-----------------WRRYVYDRK---LY------------ 265

 Worm   215 IAREPDRFRNVITNFLIAEFDAIPFQNQPKLAGH--KWRTKFLGSCIDMQQKQRYAAQIYELM-- 275
                                 |:|..:  .:.||  :|..:|.         :...|||:.||  
  Fly   266 ---------------------ALPVSD--SVTGHFREWSARFY---------RNNPAQIHRLMPW 298

 Worm   276 -------LSRPSGDHLFRRELNEILT------PVSAVHIQFLDDHLDAIIAIEKLTIEEFYNEVY 327
                   |.|.:.     ..:|.::|      |::::........|...:. |:.:  .|.:|::
  Fly   299 IHRDIMCLLRNAA-----HSVNTVMTLMSDLLPMTSLLGPTFRRRLSPYLG-ERTS--HFIHELF 355

 Worm   328 YDSIYNSFSSNFFDYNSMGRDDPQSRFEALFNQIHRDIGSTNDWMDTYVAGRLLRQSSNTDGTDR 392
                  :|:.:.:|.|  |.|........:..::..|:   .|.::|        ||||.|..:.
  Fly   356 ------NFARSPYDIN--GYDHVVQYSARVAEEVEVDL---LDMVET--------QSSNGDDLNL 401

 Worm   393 ATNNDDDSDRSE---SPEERVPTPMPDED--PREQSLARAYYEQMLEMPNRVP-LSMRAYHMMRD 451
            .. .|.|:|...   ||:...|...|...  ........::...|....:.:| :|:|....:..
  Fly   402 EV-GDSDADAINAGFSPDWSPPRVRPSTSVIVTNPGATHSFSVTMASDGSELPGISIRRTTNVGS 465

 Worm   452 RDVRV----RYP---TTEEP--VPVEPVTFGQTTRTLPISQQPTTSRSH------MTLRSAMRRL 501
            :.|.:    |.|   .:|||  :.::............|:....|||.|      :|....:...
  Fly   466 QTVAINLSMRRPAAVASEEPEVIEIDDGDAAANAEVAAINDGSNTSRRHAGATLPVTAHIELESS 530

 Worm   502 DSDRPTDEEIPPIESRPQTRR---------------------------EIERDRLLQRVREFDNR 539
            .|....||.:..:|.:|...|                           .|..:|..|...:..:|
  Fly   531 SSSGDEDECVFVLELKPPHMRTPEQVSLDSNSDSDVVFVNEQHEAAPDAIAENRSTQSPLDLASR 595

 Worm   540 SRGLSSLFRHPASSDYTSRRFTSDGYS-GLVMLSPR----------LNSTTTSSTSIPV-----Y 588
            .:|   ||..|::|...:.|    |.: .|||...|          :.|..:..:|:|.     .
  Fly   596 DQG---LFMGPSTSGAAANR----GKNWKLVMAQTRRLDQLRTLRSIRSKKSRRSSMPARSDSGS 653

 Worm   589 QPRTMTSNDFAHLNRTRSILERRHF---------------PQPPREQ-----------RIEEVEQ 627
            .|.:.:|:.|             ||               .:||:::           :.|.:.:
  Fly   654 SPSSCSSSSF-------------HFSSSSDEDSSDSSTTNSEPPKKKSRKRVANNKRSKKESIGK 705

 Worm   628 LFNRAYQNMQQTHQAIQEHASTSNAPTQIPRPATPAPAISDEE-----SRSLAEIVATINQEDAD 687
            ..:|..:...|..:.:::...:...|.:.|..::.:|:.||:|     |.|..:.....|:..:|
  Fly   706 RTSRKRKAKDQNMEMLEQQQISQKKPQRQPESSSDSPSSSDDESGGDSSESSGQPNTNNNKSSSD 770

 Worm   688 NGLDF-----ISVAHRTRSARRAAENGHP-------PE----GPPAKRSTNSRRD 726
            :..|.     :|....|..|....|:..|       |:    ||...|.|.|.|:
  Fly   771 SDDDSAVNMQLSALRATLKAEATLEDRKPVKLELQLPDDDQAGPLHSRMTPSPRE 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C32D5.11NP_001364718.1 RAD18 24..>114 CDD:227719 27/109 (25%)
RING_Ubox 26..68 CDD:418438 18/41 (44%)
ToporsNP_001261083.1 RING 102..144 CDD:238093 19/44 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto19413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23350
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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