DRSC/TRiP Functional Genomics Resources

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Protein Alignment C16C8.11 and Ubi-p5E

DIOPT Version :9

Sequence 1:NP_494548.1 Gene:C16C8.11 / 173690 WormBaseID:WBGene00015849 Length:214 Species:Caenorhabditis elegans
Sequence 2:NP_001284937.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster


Alignment Length:205 Identity:41/205 - (20%)
Similarity:91/205 - (44%) Gaps:34/205 - (16%)


- Green bases have known domain annotations that are detailed below.


 Worm    34 AKLSENRVLQATQE---LCGKLTEKQKVQDD-------TINLLLSALGQIQENQNKILNQFASMQ 88
            ||:.:...:...|:   ..||..|..:...|       |::|:|...|.:|.....:..:..:::
  Fly    28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 92

 Worm    89 SQ----LDIVKRRQDAYERDLIQQKPSVP--EQKV---GESSKKSPRSAESALKYVETCTKVVDL 144
            .:    ::.||.:        ||.|..:|  :|::   |:..:.....::..::...|...|:.|
  Fly    93 VEPSDTIENVKAK--------IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149

 Worm   145 -----CIAVSMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--K 202
                 ....::.|:..::.....:::|.:|.||:.:.|||..:..|...||.|.|.:.|:||  :
  Fly   150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214

 Worm   203 WDTSVELLVR 212
            .::::.|::|
  Fly   215 KESTLHLVLR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C16C8.11NP_494548.1 COG5391 <9..>111 CDD:227680 17/90 (19%)
UBQ 149..212 CDD:214563 17/64 (27%)
Ubi-p5ENP_001284937.1 Ubiquitin 1..76 CDD:176398 10/47 (21%)
UBQ 1..72 CDD:214563 9/43 (21%)
Ubiquitin 77..152 CDD:176398 12/82 (15%)
UBQ 77..148 CDD:214563 11/78 (14%)
Ubiquitin 153..228 CDD:176398 18/72 (25%)
UBQ 153..224 CDD:214563 17/70 (24%)
Ubiquitin 229..304 CDD:176398
UBQ 229..300 CDD:214563
Ubiquitin 305..380 CDD:176398
UBQ 305..376 CDD:214563
Ubiquitin 381..456 CDD:176398
UBQ 381..452 CDD:214563
Ubiquitin 457..532 CDD:176398
UBQ 457..528 CDD:214563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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