DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DKC1 and Dkc1

DIOPT Version :10

Sequence 1:NP_001354.1 Gene:DKC1 / 1736 HGNCID:2890 Length:514 Species:Homo sapiens
Sequence 2:NP_596910.1 Gene:Dkc1 / 170944 RGDID:621780 Length:509 Species:Rattus norvegicus


Alignment Length:509 Identity:424/509 - (83%)
Similarity:463/509 - (90%) Gaps:5/509 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MADAE-VIILPKKHKKKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNV 64
            ||||| .:..|||||||||||.|||.|||||||||:||||||||.|:||||||||||||||:|||
  Rat     1 MADAEAAMTFPKKHKKKKERKPLPEADVAEIQHAEDFLIKPESKAAQLDTSQWPLLLKNFDRLNV 65

Human    65 RTTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVT 129
            |||||||:.|||||||||||:|:||||||||||||||||||||||||||||||||||||||||||
  Rat    66 RTTHYTPIPCGSNPLKREIGEYVRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVT 130

Human   130 GCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQL 194
            ||||||||||||||||||||||||||:|||||||||..|||||||||||||||||||||||||||
  Rat   131 GCLIVCIERATRLVKSQQSAGKEYVGVVRLHNAIEGTAQLSRALETLTGALFQRPPLIAAVKRQL 195

Human   195 RVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDH 259
            ||||||||:::|||||||||:||||||||||||||||||||||||||||||||||||||:.|:||
  Rat   196 RVRTIYESRVVEYDPERRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVVGERDH 260

Human   260 MVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYE 324
            |||||||||||:|||:|:|||||||||:||||||||||||||||||||||||||||||||:||||
  Rat   261 MVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGLLRYE 325

Human   325 DGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQK 389
            ||||||||:|||||||||:|:||||||||||||||||:|||||||||||||||||||||||||||
  Rat   326 DGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQK 390

Human   390 KLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESE 454
            |.:||||||||||:|||.|||:|.::|||||:|:||...||....|.|.|:||...||||:|:|:
  Rat   391 KQLIKQGLLDKHGRPTDGTPASWTRDYVDYSDSSKKATAAEATPGPGVTADAASIVKRKRDSDSD 455

Human   455 SDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKKKKKKKAKE 508
            :||..|.....:||||||.|  :||..| |..||.||||: |.||||||.:|.|
  Rat   456 ADEATPTTTPRVKKEKKKKK--EKADGG-EEAAEDGDGDA-TRKKKKKKARAAE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DKC1NP_001354.1 Nucleolar localization 2..21 14/19 (74%)
CBF5 56..381 CDD:273073 300/324 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..514 35/66 (53%)
Nuclear and nucleolar localization 446..514 35/63 (56%)
Dkc1NP_596910.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 17/23 (74%)
Nucleolar localization. /evidence=ECO:0000250 2..22 14/19 (74%)
CBF5 57..382 CDD:273073 300/324 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..509 78/129 (60%)
Nuclear and nucleolar localization. /evidence=ECO:0000250 447..509 35/63 (56%)

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