DRSC/TRiP Functional Genomics Resources

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Protein Alignment DKC1 and dkc1

DIOPT Version :10

Sequence 1:NP_001354.1 Gene:DKC1 / 1736 HGNCID:2890 Length:514 Species:Homo sapiens
Sequence 2:XP_012824635.1 Gene:dkc1 / 100145077 XenbaseID:XB-GENE-5766174 Length:555 Species:Xenopus tropicalis


Alignment Length:539 Identity:398/539 - (73%)
Similarity:443/539 - (82%) Gaps:30/539 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MADAEVIILPKKHKKKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVR 65
            |||.|.   .||..||:..:.|..||||:|||..:||||||||||:|||||||||||||||||:|
 Frog     1 MADGEG---SKKKAKKRRSQILGAEDVADIQHEGDFLIKPESKVAQLDTSQWPLLLKNFDKLNIR 62

Human    66 TTHYTPLACGSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTG 130
            |.||||:..|||||||||.:||:|||||||||:||||||||||||||||.|||||||||||||||
 Frog    63 TAHYTPIPSGSNPLKREISEYIKTGFINLDKPANPSSHEVVAWIRRILRSEKTGHSGTLDPKVTG 127

Human   131 CLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLR 195
            ||||||:|||||||||||||||||||||||||:|...||||||||||||||||||||||||||||
 Frog   128 CLIVCIDRATRLVKSQQSAGKEYVGIVRLHNALENELQLSRALETLTGALFQRPPLIAAVKRQLR 192

Human   196 VRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHM 260
            ||||||||:||||||||||||||||||||||||||||:||||||||||||||||||||:.|||::
 Frog   193 VRTIYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHIGLLLGVGGQMQELRRVRSGVLGEKDNL 257

Human   261 VTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYED 325
            |||||||||||.:||:|||||||||::||||||.|||||||||||||||||||||||||:|||||
 Frog   258 VTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMKDSAVNAICYGAKIMLPGLLRYED 322

Human   326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
            |||:|||||||||||||||:|:||||||||||||||:||||||||||||||||||||||||||||
 Frog   323 GIELNQEIVVITTKGEAICIAVALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKK 387

Human   391 LMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQV------VAEAAKTAKRKR 449
            :||::|||||||||.:|||:.|||||||||.:.|.:..|:..|...|      .||.:...|:|:
 Frog   388 MMIQKGLLDKHGKPNESTPSGWKQEYVDYSATPKIQQAADAPKRKHVSETDSDSAEPSTLKKKKK 452

Human   450 ESESESDE-------TPPAAPQLIKKEKKKSKKDKKAKAGLESGAE---------PGDGDSDT-- 496
            :.|||..|       :..|.|  :|..|||.||||......|:.|.         .|..:.:|  
 Frog   453 KLESEDKEEHVDNADSDAATP--VKSSKKKKKKDKGGDTENETAAHSEKSKEMETAGSDEGETVL 515

Human   497 -TKKKKKKKKAKEVELVSE 514
             |||||||.|.:|.|..:|
 Frog   516 KTKKKKKKDKTEERESPAE 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DKC1NP_001354.1 Nucleolar localization 2..21 7/18 (39%)
CBF5 56..381 CDD:273073 292/324 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..514 30/89 (34%)
Nuclear and nucleolar localization 446..514 30/86 (35%)
dkc1XP_012824635.1 CBF5 53..378 CDD:273073 292/324 (90%)

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