Protein Alignment F52C6.2 and Ubi-p5E

DIOPT Version :10

• Sequence 1: NP_494128.3
• Gene: F52C6.2 / 173558
• WormBaseID: WBGene00018659
• Length: 228
• Species: Caenorhabditis elegans
• Sequence 2: NP_727078.1
• Gene: Ubi-p5E / 326237
• FlyBaseID: FBgn0086558
• Length: 534
• Species: Drosophila melanogaster
• Alignment Length: 258
• Identity: 81/258 - (31%)
• Similarity: 123/258 - (47%)
• Gaps: 70/258 - (27%)

 Worm     1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV-------VFAVSYDKDAGNQIIEMED--T 51
            |.:.:||.||||||:|...|     ||.:::.|:|:       :|       ||.|   :||  |
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF-------AGKQ---LEDGRT 55

 Worm    52 VQDVKIQEAQQ----APLRESEEV-----TGDPI--KVEASDT--NRNEENPDLAGPPAEPVIRG 103
            :.|..||:...    ..||...::     ||..|  :||.|||  |...:..|..|.|.:
  Fly    56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD----- 115

 Worm   104 TAASGRIVNVRLAGKRIVQPNRRFTSYLPSSAVRRVASPYQIRRVS-------VDGNFNVFVKNS 161
               ..|::   .|||::..              .|..|.|.|::.|       :.|...:|||..
  Fly   116 ---QQRLI---FAGKQLED--------------GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 160

 Worm   162 TGGKTTAVSIKNTDTIGTLKLKVQEKEGIPPNQQRLLFKGSELMDYRTVAHCGLRQGTSLDLV 224
            | |||..:.::.:|||..:|.|:|:||||||:||||:|.|.:|.|.||::...:::.::|.||
  Fly   161 T-GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
F52C6.2	NP_494128.3	ubiquitin	156..224	CDD:459726	30/67 (45%)
Ubi-p5E	NP_727078.1	Ubl_ubiquitin	1..76	CDD:340501	27/84 (32%)
		Ubl_ubiquitin	77..152	CDD:340501	21/99 (21%)
		Ubl_ubiquitin	153..228	CDD:340501	32/71 (45%)
		Ubl_ubiquitin	229..304	CDD:340501
		Ubl_ubiquitin	305..380	CDD:340501
		Ubl_ubiquitin	381..456	CDD:340501
		Ubl_ubiquitin	457..532	CDD:340501