| Sequence 1: | NP_872030.2 | Gene: | T02H6.1 / 173461 | WormBaseID: | WBGene00020171 | Length: | 518 | Species: | Caenorhabditis elegans |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001014529.1 | Gene: | U3-55K / 3346176 | FlyBaseID: | FBgn0053505 | Length: | 484 | Species: | Drosophila melanogaster |
| Alignment Length: | 499 | Identity: | 174/499 - (34%) |
|---|---|---|---|
| Similarity: | 277/499 - (55%) | Gaps: | 66/499 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Worm 3 AFFVKAGAKKSGGGAAATRKRKN------------GGKSDAKSEEMAA----KMSRRQKIMAATE 51
Worm 52 IHSDEED---SLAGS----AAASEAGSDVEYEDAHERNYREAKKLLDKIQSTTTTQEE------- 102
Worm 103 VAEKLRDDAVARTGTQVKRVADVVE-LEDDLEISYKPHRLSPLC-VAFSPDAKYVISCGKESSIV 165
Worm 166 KFNVGTRKVVGIIKRTKKRAGV---PEEP-----TNAHYGVIFTVAVSPDQKFIASGGFDQVVKI 222
Worm 223 WNFDSLEHIKDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQLGLVDTMYGHQDGVQQIG 287
Worm 288 VLSKQRVATVGGRDRSARLWKVEDESQLMFSGLQNCVSLDCVAMINEEHFATGSADGSIALWSFW 352
Worm 353 KKRALHVRKQAHGT-QNGSGRWIVALAVLPYSDLLASGSNEGELKLWKISENFRQLTPFFSYSIP 416
Worm 417 GFINSINFAPNGKSIVVGAGKEHKDGRWWVDREARNQVVILPIK 460 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| T02H6.1 | NP_872030.2 | WD40 | 132..435 | CDD:238121 | 115/312 (37%) |
| WD40 repeat | 145..194 | CDD:293791 | 15/57 (26%) | ||
| WD40 repeat | 200..236 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 241..277 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 284..318 | CDD:293791 | 16/33 (48%) | ||
| WD40 repeat | 326..363 | CDD:293791 | 16/36 (44%) | ||
| WD40 repeat | 374..412 | CDD:293791 | 14/37 (38%) | ||
| U3-55K | NP_001014529.1 | Upf2 | 55..>125 | CDD:281974 | 19/72 (26%) |
| WD40 | <150..484 | CDD:225201 | 130/341 (38%) | ||
| WD40 | 156..416 | CDD:295369 | 102/272 (38%) | ||
| WD40 repeat | 163..203 | CDD:293791 | 12/46 (26%) | ||
| WD40 repeat | 218..254 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 259..295 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 302..336 | CDD:293791 | 16/33 (48%) | ||
| WD40 repeat | 342..379 | CDD:293791 | 16/36 (44%) | ||
| WD40 repeat | 391..431 | CDD:293791 | 15/39 (38%) | ||
| WD40 repeat | 436..461 | CDD:293791 | 9/24 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160159821 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3452 | |
| Inparanoid | 1 | 1.050 | 270 | 1.000 | Inparanoid score | I1827 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54739 | |
| OrthoDB | 1 | 1.010 | - | - | D453052at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004346 | |
| OrthoInspector | 1 | 1.000 | - | - | oto18179 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR19865 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1935 |
| SonicParanoid | 1 | 1.000 | - | - | X3065 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 13.040 | |||||