Protein Alignment T02H6.1 and U3-55K

DIOPT Version :10

• Sequence 1: NP_872030.2
• Gene: T02H6.1 / 173461
• WormBaseID: WBGene00020171
• Length: 518
• Species: Caenorhabditis elegans
• Sequence 2: NP_001014529.1
• Gene: U3-55K / 3346176
• FlyBaseID: FBgn0053505
• Length: 484
• Species: Drosophila melanogaster
• Alignment Length: 499
• Identity: 174/499 - (34%)
• Similarity: 277/499 - (55%)
• Gaps: 66/499 - (13%)

 Worm     3 AFFVKAGAKKSGGGAAATRKRKN------------GGKSDAKSEEMAA----KMSRRQKIMAATE 51
            :||:|.|||       .|:||||            ||| ..||...|.    |..||.| ....|
  Fly     4 SFFLKPGAK-------GTKKRKNPAATTKGKPLKKGGK-PGKSTPAAGGPVPKKQRRPK-EEDEE 59

 Worm    52 IHSDEED---SLAGS----AAASEAGSDVEYEDAHERNYREAKKLLDKIQSTTTTQEE------- 102
            |.||:|:   .|.|.    |.:|:.|   |.|...::..|.||:.|.:|:.....:.|
  Fly    60 IASDDEEYNSDLGGDDNTLAFSSDEG---EEETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQS 121

 Worm   103 VAEKLRDDAVARTGTQVKRVADVVE-LEDDLEISYKPHRLSPLC-VAFSPDAKYVISCGKESSIV 165
            |.::|:.:.:...|...:.:|..:: .|....:.:|.|. :|:| :|.|||.|::.:..|...::
  Fly   122 VEQRLQTEYLDSVGKLRRNIAGSLKACESSRILKHKLHH-TPICALALSPDGKFLYTGAKSQFLL 185

 Worm   166 KFNVGTRKVVGIIKRTKKRAGV---PEEP-----TNAHYGVIFTVAVSPDQKFIASGGFDQVVKI 222
            |:...|.||:       :::.|   .|||     ..:|   :.::.:|.|.|::|.......::|
  Fly   186 KWCTETGKVL-------EKSDVLSHREEPETGKKRRSH---VISICLSSDMKYLALAEGGPHIQI 240

 Worm   223 WNFDSLEHIKDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQLGLVDTMYGHQDGVQQIG 287
            |...:::|||.|.|||..:..|.|:..|::||||::|||||:|.:|::..|::::|||..|..|.
  Fly   241 WCPQTMKHIKTLKGHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSID 305

 Worm   288 VLSKQRVATVGGRDRSARLWKVEDESQLMFSGLQNCVSLDCVAMINEEHFATGSADGSIALWSFW 352
            .||::|..|.||.|.|.|:||:.:||||:::|.::  |::||..||:|||.:|..||:|.|||..
  Fly   306 ALSRERAITAGGSDCSLRIWKITEESQLIYNGHKD--SIECVKYINDEHFVSGGMDGAIGLWSAL 368

 Worm   353 KKRALHVRKQAHGT-QNGSGRWIVALAVLPYSDLLASGSNEGELKLWKISENFRQLTPFFSYSIP 416
            ||:.:...:.|||. :||...||.|:||:..:||:|:||.:|.::||:.:.|.|::....|.||.
  Fly   369 KKKPICTTQLAHGVGENGVANWITAIAVVVNTDLVATGSCDGCVRLWQTNPNARKMNLIQSISIA 433

 Worm   417 GFINSINFAPNGKSIVVGAGKEHKDGRWWVDREARNQVVILPIK 460
            ||||.:.|..:|..:.|..|:||:.||||..:||:||||:|.:|
  Fly   434 GFINGLAFNADGSKLFVATGQEHRLGRWWRLKEAKNQVVVLDVK 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
T02H6.1	NP_872030.2	WD40	<137..436	CDD:441893	115/308 (37%)
		WD40 repeat	145..194	CDD:293791	15/57 (26%)
		WD40 repeat	200..236	CDD:293791	10/35 (29%)
		WD40 repeat	241..277	CDD:293791	15/35 (43%)
		WD40 repeat	284..318	CDD:293791	16/33 (48%)
		WD40 repeat	326..363	CDD:293791	16/36 (44%)
		WD40 repeat	374..412	CDD:293791	14/37 (38%)
U3-55K	NP_001014529.1	WD40	156..416	CDD:475233	102/272 (38%)
		WD40 repeat	163..203	CDD:293791	12/46 (26%)
		WD40 repeat	218..254	CDD:293791	10/35 (29%)
		WD40 repeat	259..295	CDD:293791	15/35 (43%)
		WD40 repeat	302..336	CDD:293791	16/33 (48%)
		WD40 repeat	342..379	CDD:293791	16/36 (44%)
		WD40 repeat	391..431	CDD:293791	15/39 (38%)
		YncE	<420..477	CDD:442618	26/56 (46%)
		WD40 repeat	436..461	CDD:293791	9/24 (38%)