DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mitf and Mitf

DIOPT Version :9

Sequence 1:NP_001106669.1 Gene:Mitf / 17342 MGIID:104554 Length:526 Species:Mus musculus
Sequence 2:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster


Alignment Length:624 Identity:179/624 - (28%)
Similarity:250/624 - (40%) Gaps:225/624 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse    37 SAEHSGASKPPLS------SSTMTSRILLRQQLMREQMQEQERREQQQKL--------------- 80
            :||......||||      ::|.|||..|:.||.||  |:|:...|||.|               
  Fly   154 TAEPRIVGLPPLSGGPTFKTATPTSRTQLKLQLQRE--QQQQMMIQQQTLDTAMDPKMHLLFGSG 216

Mouse    81 -------------------------QAAQFMQQRVAVSQTPAINVSVPTTLPS-ATQVPMEVLKV 119
                                     |.:|.:|....:..:....:.||  |.| ...||.:||:|
  Fly   217 QGLMESEFIDSGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVP--LQSIGVDVPPQVLQV 279

Mouse   120 QTHLENPTKYHIQQAQRHQVKQYLSTT--------------LANKHAS----------QVLSSP- 159
            .|.|||||:||:.|.|::||:||||.:              |||..||          :.:..| 
  Fly   280 STVLENPTRYHVIQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPL 344

Mouse   160 -------CPN-------QPGDHAMPPVP------------------------------------- 173
                   |.:       .|.|.|||..|                                     
  Fly   345 ERTNRFGCDSAVSAKRIMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQ 409

Mouse   174 -GSSAPNSPMAMLTLNS---NCEKEAFYKFEEQSRAESECPGMNTHSRASCMQMDDVIDDII--- 231
             |.|..||.::....:|   |..:.:......||.:....|.:::.: .|..:.||:.|||:   
  Fly   410 LGLSKANSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVA-TSVSEPDDIFDDILQND 473

Mouse   232 --SLESSYNEEILGLMDPALQMANTLPVSGNLIDLYSNQGLPPPGLTISNSCPANLPNIKRELTA 294
              :.:.::|.|                                  |:|... |.||         
  Fly   474 SFNFDKNFNSE----------------------------------LSIKQE-PQNL--------- 494

Mouse   295 CIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP------DMRWNKGTI 353
                |::|..||||:||||||||:|||||||||||||||||||:||.:|.      |:|.|||||
  Fly   495 ----TDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTI 555

Mouse   354 LKASVDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQARAHGLSLIPS--TGLCSPD 416
            ||:|||||:.|:.|..|.:..|.||:::|..||.|:.|::||||||::||:.|..:  |.|.:| 
  Fly   556 LKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLSENHLTSLSAP- 619

Mouse   417 LVNRIIKQEPVLENCSQELVQHQA-----DLTCTTTLDLTDGTITFTNNLGTMPESSPAYSIPRK 476
                   .:|.|::.|......::     |......:.:.||.                   ...
  Fly   620 -------TQPYLKSFSLSPTASRSRRSLFDQPVEKKIQVIDGA-------------------DGN 658

Mouse   477 MGSNLEDILMDDALSPVGVTDPLLSSVSPGASKTSSRRS 515
            ||.|..|..|:|....|...||:|||.|...|...|..|
  Fly   659 MGMNQVDEFMEDCKYAVQGGDPMLSSHSHMQSAPQSPSS 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001106669.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..54 7/22 (32%)
MITF_TFEB_C_3_N 56..194 CDD:406384 59/258 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..179 10/76 (13%)
Transactivation. /evidence=ECO:0000250 224..291 12/71 (17%)
bHLHzip_MITF 300..403 CDD:381496 66/108 (61%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:23207919 374..395 8/20 (40%)
DUF3371 397..522 CDD:403149 31/126 (25%)
DNA binding regulation. /evidence=ECO:0000250 401..431 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 9/20 (45%)
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 14/94 (15%)
HLH 505..570 CDD:238036 18/71 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847996
Domainoid 1 1.000 85 1.000 Domainoid score I8160
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I4416
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm43034
orthoMCL 1 0.900 - - OOG6_109347
Panther 1 1.100 - - LDO PTHR45776
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 1 1.000 - - X566
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.790

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