DRSC/TRiP Functional Genomics Resources

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Protein Alignment hmp-2 and p120ctn

DIOPT Version :9

Sequence 1:NP_001252425.1 Gene:hmp-2 / 173338 WormBaseID:WBGene00001979 Length:704 Species:Caenorhabditis elegans
Sequence 2:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster


Alignment Length:811 Identity:147/811 - (18%)
Similarity:262/811 - (32%) Gaps:310/811 - (38%)


- Green bases have known domain annotations that are detailed below.


 Worm    23 LPTTMLLHSTNSYSIFTDHEVETRTSRIRSAMFPDWIPP---TSAAEAT---NSTTSIVEMMQMP 81
            |.||:.......|...:::.|...|..|.|....:.:.|   ||.|..|   |:|:||......|
  Fly    96 LATTVRYVQAGQYEDTSEYGVAGLTCGIDSEYTAEAVVPYCYTSDANYTGIQNTTSSIKPFSGRP 160

 Worm    82 TQ-----------------------QLKQSVMDLLT------------YEGS-NDMSGL------ 104
            ..                       :|.|..|..:.            .||| ||:...      
  Fly   161 FNDNINGAEAVADSQCRTFKSSAEFKLPQFAMSSINTVPQRLEEKDDYIEGSENDICSTMRWRDP 225

 Worm   105 SLPDLVKLMCDHDESVVARAV----HRAYMLSREDPNFFNAPGFDHRSF--VEALMAASKSSNVN 163
            :|.:::..:.:...::.|.|.    |..||   :|||....     ||.  :..|:......:..
  Fly   226 NLSEVISFLSNPSSAIKANAAAYLQHLCYM---DDPNKQRT-----RSLGGIPPLVRLLSYDSPE 282

 Worm   164 VRRNAIGALSHMS------EQRGGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSD 222
            :.:||.|||.::|      |.:.|   |..:||:|.::.:|..|.|:.|...||   .:|.::|.
  Fly   283 IHKNACGALRNLSYGRQNDENKRG---IKNAGGIAALVHLLCRSQETEVKELVT---GVLWNMSS 341

 Worm   223 SRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREYSD 287
            .....|:                             :||:|        |:.  ::.|:::.:|.
  Fly   342 CEDLKRS-----------------------------IIDEA--------LVA--VVCSVIKPHSG 367

 Worm   288 HRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTAKDERSQTAILVAMRNLSDSATNE- 351
                 :..|.|                        .|.|.:...|:.:.:|   ||:|.:..:. 
  Fly   368 -----WDAVCC------------------------GETCFSTVFRNASGVL---RNVSSAGEHAR 400

 Worm   352 ---ENLTQLIIKLLEIIR-------VANDGMTACAC--GTLS----------------------- 381
               .|...|:..||.::|       :.|..:..|.|  ..||                       
  Fly   401 GCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERVI 465

 Worm   382 -------NLTCNNTRNKQTVCSHGGIDAL-------------VTAIRRLPEVEEVTEPALCALRH 426
                   ||.|..|..|:...::.  |||             ||..:.....|::.:|       
  Fly   466 PSSSKGENLGCFGTNKKKKEANNS--DALNEYNISADYSKSSVTYNKLNKGYEQLWQP------- 521

 Worm   427 CTARHSLAEEAQSELRFCQAFPVILDQLETLRTP-VIKAALGVIRN-SALLQTNLIELTQEQTAN 489
                              :.....|..|::...| .::||.|.|:| ||......|::  ..|..
  Fly   522 ------------------EVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDI--RATVR 566

 Worm   490 GHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLA----NHPAVAAACCDDIG 550
            ....:.:.:::||..:..                |:....:||..||    |...:......|:.
  Fly   567 KEKGLPILVELLRMEVDR----------------VVCAVATALRNLAIDQRNKELIGKYAMRDLV 615

 Worm   551 Q---VGNPECPPFLDLLHRLLAHPRLGSMDDEVLEREILGLLYQLSKRPDGARA-VESTGVSALL 611
            |   .||             :.|.:  :..|:.:...:..:...:.|.|:.:|: ::|.|:..|:
  Fly   616 QKLPSGN-------------VQHDQ--NTSDDTITAVLATINEVIKKNPEFSRSLLDSGGIDRLM 665

 Worm   612 -MESRGSQYKS-VVTYANGVLSNLKRGDSAAIMNMSNSYDYEMSGSAADWQRDGL---------- 664
             :..|..:|.| |:.:|:.||                   |.|      ||.:.|          
  Fly   666 NITKRKEKYTSCVLKFASQVL-------------------YTM------WQHNELRDVYKKNGWK 705

 Worm   665 ERELFAEMYPTNDGGHSESINMALNNSQMRP 695
            |::..::.:..::...|...|  :||:..||
  Fly   706 EQDFVSKHFTAHNTPPSSPNN--VNNTLNRP 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hmp-2NP_001252425.1 ARM 106..216 CDD:237987 30/121 (25%)
HEAT_2 106..>185 CDD:290374 20/90 (22%)
HEAT repeat 106..137 CDD:293787 7/34 (21%)
HEAT repeat 149..177 CDD:293787 7/35 (20%)
ARM 183..303 CDD:237987 21/119 (18%)
armadillo repeat 185..216 CDD:293788 10/30 (33%)
armadillo repeat 224..260 CDD:293788 1/35 (3%)
armadillo repeat 275..302 CDD:293788 4/26 (15%)
Arm 305..346 CDD:278915 6/40 (15%)
armadillo repeat 309..349 CDD:293788 7/39 (18%)
ARM 357..473 CDD:237987 29/169 (17%)
armadillo repeat 358..383 CDD:293788 8/63 (13%)
armadillo repeat 391..429 CDD:293788 8/50 (16%)
armadillo repeat 438..471 CDD:293788 7/33 (21%)
ARM 518..633 CDD:237987 25/124 (20%)
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 31/127 (24%)
armadillo repeat 227..252 CDD:293788 3/24 (13%)
armadillo repeat 260..296 CDD:293788 8/40 (20%)
armadillo repeat 304..339 CDD:293788 12/40 (30%)
ARM 307..442 CDD:237987 36/208 (17%)
armadillo repeat 347..392 CDD:293788 14/115 (12%)
armadillo repeat 515..556 CDD:293788 12/65 (18%)
ARM 516..643 CDD:237987 28/184 (15%)
armadillo repeat 562..596 CDD:293788 6/49 (12%)
armadillo repeat 601..641 CDD:293788 7/54 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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