Sequence 1: | NP_493178.1 | Gene: | hmg-20 / 173124 | WormBaseID: | WBGene00012209 | Length: | 386 | Species: | Caenorhabditis elegans |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001138203.1 | Gene: | Dsp1 / 117294 | FlyBaseID: | FBgn0278608 | Length: | 397 | Species: | Drosophila melanogaster |
Alignment Length: | 265 | Identity: | 53/265 - (20%) |
---|---|---|---|
Similarity: | 105/265 - (39%) | Gaps: | 45/265 - (16%) |
- Green bases have known domain annotations that are detailed below.
Worm 7 DSTTGPAAKSLPTSDVEEDEAAPDLKAESEDVTSSEEMQNKNPVSAPEKRAKTASFSPPPALSP- 70
Worm 71 AHSIQMENEEIEVKMEVDS------------------DEEEKKLPKITEK-----RAKMVYKKKP 112
Worm 113 E-----KEKEAVPFIDPNAPKRNRSGYVHFIIHRRASYSKAVMSQ---REINISLAADWQKLTAE 169
Worm 170 ERIPFQQRADEEKVKYLELMEEYKKT----------DSHKEFQKKRAKFLSSQSNGSKNAKKRRQ 224
Worm 225 ADSDD 229 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hmg-20 | NP_493178.1 | HMG | 126..193 | CDD:197700 | 18/69 (26%) |
Dsp1 | NP_001138203.1 | HMG-box | 182..252 | CDD:294061 | 13/69 (19%) |
HMGB-UBF_HMG-box | 275..339 | CDD:238686 | 15/64 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5648 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3288 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |