DRSC/TRiP Functional Genomics Resources

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Protein Alignment rskn-1 and S6k

DIOPT Version :10

Sequence 1:NP_001122504.1 Gene:rskn-1 / 172647 WormBaseID:WBGene00011352 Length:804 Species:Caenorhabditis elegans
Sequence 2:NP_523941.2 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster


Alignment Length:429 Identity:197/429 - (45%)
Similarity:267/429 - (62%) Gaps:46/429 - (10%)


- Green bases have known domain annotations that are detailed below.


 Worm    45 SDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEIDIGDV--------------------RKC 89
            ||.:..|...:|.::        |.:.|...|.:..|::.||                    :.|
  Fly     5 SDPSELFDLELHDLE--------LQDDKARDSDDDRIELDDVDLEPELCINLHQDTEGQETIQLC 61

 Worm    90 GE-------KADPRQFELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKATL--KVRDRQRT 145
            .|       |..|:.|||.||||:|.:||||.|||..|||:...:||||||||::  ..:|...|
  Fly    62 EENVNPGKIKLGPKDFELKKVLGKGGYGKVFQVRKTAGRDANKYFAMKVLKKASIVTNQKDTAHT 126

 Worm   146 KLERNILAHISHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLA 210
            :.|||||..:.|||||:|.|||||:|||||||::|.||:||..|.:|.:|.||...|||:|:.||
  Fly   127 RAERNILEAVKHPFIVELVYAFQTDGKLYLILEYLSGGELFMHLEREGIFLEDTTCFYLSEIILA 191

 Worm   211 LEHLHSLGIVYRDLKPENILLDADGHIKVTDFGLSKEAIDSEKKTYSFCGTVEYMAPEVINRRGH 275
            |.|||.|||:|||||||||||||.||:|:|||||.||.|.....|::||||:||||||::.|.||
  Fly   192 LGHLHKLGIIYRDLKPENILLDAQGHVKLTDFGLCKEHIQEGIVTHTFCGTIEYMAPEILTRSGH 256

 Worm   276 SMAADFWSLGVLMFEMLTGHLPFQGRDRNDTMTQILKAKLSMPHFLTQEAQSLLRALFKRNSQNR 340
            ..|.|:||||.|||:||||..||...:|..|:..||||||::|.:||.||:.|:|.|.||....|
  Fly   257 GKAVDWWSLGALMFDMLTGVPPFTAENRKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEPQR 321

 Worm   341 LGAGPDGVEEIKRHAFFAKIDFVKLLNKEIDPPFKPALSTVDSTSYFDPEFTKRTPKDSP---AL 402
            ||:||:....::.|.||..:::..:|.:.::||.||.|.:.|..|.||..||::.|.|||   .|
  Fly   322 LGSGPEDAAAVQIHPFFKHVNWDDVLARRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDSPDDTTL 386

 Worm   403 PASANGHEIFRGFSFVSNAVMEE----RKLIAKSVRSVP 437
            ..|||  .||:||::|:.:::|:    .::.|:|.|..|
  Fly   387 SESAN--LIFQGFTYVAPSILEDMHRANRMPARSPRRTP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rskn-1NP_001122504.1 STKc_RSK_N 102..418 CDD:270734 174/320 (54%)
STKc_RSK_C 447..744 CDD:270993
S6kNP_523941.2 STKc_p70S6K 81..402 CDD:270736 175/322 (54%)
Blue background indicates that the domain is not in the aligned region.

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