DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlh-2 and da

DIOPT Version :9

Sequence 1:NP_001021581.1 Gene:hlh-2 / 172458 WormBaseID:WBGene00001949 Length:399 Species:Caenorhabditis elegans
Sequence 2:NP_001356956.1 Gene:da / 34413 FlyBaseID:FBgn0267821 Length:775 Species:Drosophila melanogaster


Alignment Length:443 Identity:117/443 - (26%)
Similarity:188/443 - (42%) Gaps:104/443 - (23%)


- Green bases have known domain annotations that are detailed below.


 Worm    27 PNAYDYPYNIDPTTIQMPDYWSGYHLNPYP---PMQTTDIDYSSAFLPTHPPTETPASV---AAP 85
            |:|:.:       |:.:|......|..|:|   ...:..:..|.||      :...|||   .|.
  Fly   226 PHAHSH-------TLPLPHALPHGHTLPHPHHSQQNSPAVQSSDAF------SGAGASVKVAGAG 277

 Worm    86 TSATSDIK-----PIHATSSTSTTAPST---APAPTSTTDVLELKPTTAPATNSAETSAIVAPQP 142
            .|:.:.::     |...:.|:..:.|||   :|.|. |..|:......:.:..|....:::...|
  Fly   278 NSSAAALRQQMYMPADQSISSFGSNPSTPVNSPPPL-TQSVVGGGGEPSVSGGSGWGHSVLNGGP 341

 Worm   143 LTNLTAPIDAMSSMYTWPQTYPGYLPPSEDNKASEAVNPYIS-IPPTYTFGADPSVADFSSYQQQ 206
            .::..:.:..:||::|....:.|.   ..:.:..:|:|...: ..|....|.:.|:|...:....
  Fly   342 SSSYASEMVPVSSLHTMASVFQGV---RMEERLDDALNVLRNHCEPEMLAGVNQSLASIDNIDAL 403

 Worm   207 LAGQPN-----GLGGDTNLVDYN------HQFPPAGMSPHFDPNGYPGMTGMPPGSSAS--SVRN 258
            .:..||     |.||::..|...      |:....|.:      ...|.:|...|.:.|  |::.
  Fly   404 TSFVPNSPSHLGSGGNSGSVSNTSNAALVHEVLALGAA------AAAGTSGQSVGGAGSLASLKL 462

 Worm   259 DKSAS----RATSRRRVQGPPSSGIPTRHSSSSRL---------------SDNESM--------- 295
            |:|||    :.|.:|:.....|:.:|...|::|.|               |.|..:         
  Fly   463 DRSASTSLPKQTKKRKEHTAISNSVPAGVSTTSSLTSLDISDTKPTSSIESSNSGLQQHSQGKGT 527

 Worm   296 --------SDDKDTD------------RRSQNNARERVRVRDINSAFKELGRMCTQHNQNTERNQ 340
                    |.|:|.|            ||..||||||:|:||||.|.|||||||..| ..:::.|
  Fly   528 KRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKELGRMCMTH-LKSDKPQ 591

 Worm   341 TKLGILHNAVSVITQLEEQVRQRNMNPKVMAGMKRKPDDDKMKMLDDNAPSAQ 393
            ||||||:.||.||..||:|||:||:|||. |.:||:.::   |..|....|||
  Fly   592 TKLGILNMAVEVIMTLEQQVRERNLNPKA-ACLKRREEE---KAEDGPKLSAQ 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlh-2NP_001021581.1 bHLH_E-protein_E47-like 297..368 CDD:381513 44/82 (54%)
daNP_001356956.1 HLH 560..613 CDD:197674 34/53 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159476
Domainoid 1 1.000 66 1.000 Domainoid score I6570
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001459
OrthoInspector 1 1.000 - - oto19912
orthoMCL 1 0.900 - - OOG6_105744
Panther 1 1.100 - - LDO PTHR11793
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4532
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.960

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