DRSC/TRiP Functional Genomics Resources

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Protein Alignment nuo-2 and ND-30

DIOPT Version :9

Sequence 1:NP_871796.1 Gene:nuo-2 / 172363 WormBaseID:WBGene00020417 Length:268 Species:Caenorhabditis elegans
Sequence 2:NP_647775.1 Gene:ND-30 / 38378 FlyBaseID:FBgn0266582 Length:265 Species:Drosophila melanogaster


Alignment Length:256 Identity:155/256 - (60%)
Similarity:188/256 - (73%) Gaps:9/256 - (3%)


- Green bases have known domain annotations that are detailed below.


 Worm     9 AVSRQIVRNSPISTTAAVAQTNQTGDKKESPKKPTIWKIDEHKRERLANFGKYAAECLPKFVQKV 73
            |:|.:.|..:..||...:|.|.....||..  |||:.:.|...|..|::||:|.||||||:||||
  Fly    16 ALSAKHVVPAAGSTALRMASTTPVEPKKAD--KPTVRQPDAVARSHLSDFGRYVAECLPKYVQKV 78

 Worm    74 QFAAGDELELLIHPSGVVPVLSFLKGNHSAQFTNLTFITGMDVPTRKNRLEVIYSLYSVRFNARV 138
            |..||||||:||.|.||||||.|||.:|.||||||..|.|:|||.||||.||:|:|.|:|:|:|:
  Fly    79 QLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGVDVPCRKNRFEVVYNLLSLRYNSRI 143

 Worm   139 RVRTYTDEIAPIDSATPVFKGADWFEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSG 203
            ||:|||||:.|:|||..|.|.|:|:|||::|||||:|.||||||||||||||||||.|:|:||||
  Fly   144 RVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPQRRDFPLSG 208

 Worm   204 YNEVRYDPELKRVVYEPSELAQEFRKFDLNTPWETFPAFRNQSITSGYETILEVAEP-TPA 263
            |.|:|||.|.||||.||.|||||||||||:.|||.||.|||.:..:      ||..| .||
  Fly   209 YVELRYDDEKKRVVCEPLELAQEFRKFDLSAPWEQFPNFRNANPPA------EVVPPQAPA 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nuo-2NP_871796.1 PRK06074 53..237 CDD:235691 129/183 (70%)
ND-30NP_647775.1 PRK06074 60..242 CDD:235691 129/181 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167636
Domainoid 1 1.000 188 1.000 Domainoid score I1963
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3346
Inparanoid 1 1.050 306 1.000 Inparanoid score I1587
Isobase 1 0.950 - 0.906565 Normalized mean entropy S2902
OMA 1 1.010 - - QHG51846
OrthoDB 1 1.010 - - D1276923at2759
OrthoFinder 1 1.000 - - FOG0005716
OrthoInspector 1 1.000 - - oto19403
orthoMCL 1 0.900 - - OOG6_101398
Panther 1 1.100 - - LDO PTHR10884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3435
SonicParanoid 1 1.000 - - X4118
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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