DRSC/TRiP Functional Genomics Resources

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Protein Alignment Anapc1 and shtd

DIOPT Version :9

Sequence 1:NP_032595.2 Gene:Anapc1 / 17222 MGIID:103097 Length:1944 Species:Mus musculus
Sequence 2:NP_573025.2 Gene:shtd / 32473 FlyBaseID:FBgn0004391 Length:2030 Species:Drosophila melanogaster


Alignment Length:2129 Identity:733/2129 - (34%)
Similarity:1105/2129 - (51%) Gaps:326/2129 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 MIAAGDLQ-EFVPFGRDHCKHH-------------PNALNLQLRQLQPASELWSSDGAAGLVGSL 61
            |||..:.. ||||.||.....|             |...:|.|::||..:  .||.|.....|..
  Fly     1 MIAVAEPPLEFVPRGRQTSAEHPGPHDQPMARHQLPTTEHLLLQRLQNVN--ISSAGEDCPSGGQ 63

Mouse    62 QEVTI------HEKQKESWQLRKGVSE------------------------IGDAADY----DEE 92
            :..|:      :|..:|...||:.::|                        :....||    :||
  Fly    64 ESWTVRELYDDYEASEERAALRRKLTERTKRCGLQATSLPNRLLNPPLVRRVEPMCDYMVNNEEE 128

Mouse    93 LYVAGNMVIWSKG---SKSQALAVYK--AFTVDSTVQQALWCD--FI---ISQDKSEKIYKSHEL 147
            |||..|.|:|::|   .......||:  .||.|:.|:.|.:.:  |:   ::|.|: .::...:.
  Fly   129 LYVNRNTVVWTQGVNDDDDTDNGVYRRMCFTTDTPVRFACFLNRSFVRGRLAQLKA-AVHPDDDH 192

Mouse   148 EKCICILQSSCMNMHSIDGKDYIASLPFQVANVWATKYGLLFERCSSSHEVPPSLPREPLPTMFS 212
            ...||::....:.::..:|:|::|:|.|.|:.:|.||||||.|:.||:..:  |....|:|.:||
  Fly   193 LTAICVMDQDALRVYCSNGEDFLANLDFPVSQLWQTKYGLLLEKDSSNALI--SHMSIPMPRLFS 255

Mouse   213 MLHPLDEITPLVCKSGSLFGSSRVQYVVDPAVKIVFLNIDPSIVMTYDAVQNVHSVWTLRRVKPE 277
            |.|||.|..|:|.|:.:  ||:  .|:.:|...:||...:..:||.|||....|.|..||:|.||
  Fly   256 MSHPLHEACPVVLKTAT--GST--GYMTEPEYTVVFTTEESDLVMLYDAKFFKHFVARLRKVTPE 316

Mouse   278 EENAVLKFPEQAGTLQ-------NATTSSSLTAHLRSLSKGESPVASPFQNYSSIHSQSRSTSSP 335
            |.|.|.:..|...||.       |:.:|:..|        |.:|.|:           :.|.::.
  Fly   317 EINYVSQQMELGQTLMGPRSMAGNSFSSTKQT--------GATPKAT-----------NLSFAAR 362

Mouse   336 SLHSRSPSISNMAALSRAHSPALGVHSFSG----AQRFNLSSHSQSPKRHSISHSPSGSFND--- 393
            ::::.:..:.|...||::       .||||    :.|.:|.: ..|..:.|||.. |.|..|   
  Fly   363 NINTTTTGMGNQFGLSQS-------QSFSGVLGQSNRASLGT-PLSQLQSSISQQ-SMSVKDMRK 418

Mouse   394 -SFLAPETEPIVPELCIDHLWTETLPNI-REKNSQASKVFITTDLCGQKFLCFLVEAQLQLRCVK 456
             :.:.| .:||.||||::|:|||.:... ||....|::.||.|||.||.|||:|:....:|:.|:
  Fly   419 LTHVKP-AKPIEPELCMEHIWTENIYGTQREFCEMATRAFIHTDLVGQTFLCYLLARSCRLQLVR 482

Mouse   457 FQESNDKTQLIFGSVTNIHAKDAAPVEKIHTMLVLEGNGNLVLYTGVVRVGKVFI------PGLP 515
            ..........:....:.:.||||..::::|.:.||:.:|:|:||||.|.:.||.|      ..:|
  Fly   483 LTGYGRGEVQLSTHASTLAAKDAVGLKRMHMIAVLDPSGSLLLYTGTVLISKVHITPFLAPTSIP 547

Mouse   516 APSLTMSNMMPRPS---------TPLDGVGTPKPLSKLLGSMDEVVLLSPVPELRDSSKL----- 566
            .|.:|.....|.||         ||:...|   |.|.:.......|      |:|.||.|     
  Fly   548 TPLVTPMTAAPSPSASPAPSHVKTPMAAAG---PASGIPSGSSSFV------EVRRSSLLPTKAP 603

Mouse   567 -NDSLYNEDC-------------TFQQLGTYIHSVRDPVHNRVTLELSNGSMVRITIPEVATSEL 617
             :.:.:.|:.             |.:|......|:|||..||:||..:.|.|:||.:|.:..:.|
  Fly   604 GDVAAFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLVYATGRMLRIALPFLNDTRL 668

Mouse   618 VQTCLQAIKFILPKEVAIQVLVKWYNVHSAPGGP--SCHSEWSLFVICLLNMMGY---------- 670
            :..|:..::.:|.....:..:::||:..:.||..  |...||.||...||.:||.          
  Fly   669 LTRCVATLRQVLSPTQFLDFVIRWYSDRNPPGSRNYSIEQEWLLFRSTLLALMGLTAAPDVDAGE 733

Mouse   671 NTDRLAW-------------TRSFD-----FEGSLSPVIAPKKAR---PSDTGSDEDWEYLLNSE 714
            |..|.|.             |.|.|     ...:|.....|||.|   ..|..:|:|||:|    
  Fly   734 NYARCATPPLHTQFGGGATATESSDGSSCSSNSTLGGQDEPKKRRIYNDCDDFTDDDWEFL---- 794

Mouse   715 YHRNVESHLLNKSLCLTALEVSNAKDEDFSQNLSLDSSTLLFAHIPAIFFVLHLVYEELKLNTLM 779
                         |..|.|....|....:|.|:    ..|||..||||||.|||:||:|||:...
  Fly   795 -------------LLQTTLAPCGADGHSYSVNI----GALLFRMIPAIFFSLHLLYEDLKLDADF 842

Mouse   780 GEGICSLIDLLVQLARDLKLDSYLDHYYRDSPTLVKTTGQVCTIDQGQMGFMHHPPFFTSEPPSI 844
            ...:..|...|.|||.|::|:||:.||..|.|.|...||::..:.......|.|........||:
  Fly   843 YGALPYLATFLHQLAIDMQLESYVLHYILDFPELSNRTGKLSLLGAEHGAMMLHQELLRVPAPSV 907

Mouse   845 YQWVSSCLKG-EGMPPYPYLPGICERSRLVVLSIALYTLGDESCVSDETCQYLSKVTSTPQKPQA 908
            :..:...:.| |.:.||.:|..:.||||:::..::|.|.|      .|...|..::...|...||
  Fly   908 FAQLEHIIVGEEEVMPYTFLECVNERSRILLQLVSLVTHG------HERLNYWWQLLEIPGAVQA 966

Mouse   909 EQEENRFTFRHSASVSVLAER---LVVWMASVGFTLRDLETLPFGIALPIRDAIYHCREQPDSDW 970
                 .||.|...:::..|.|   ::..:.::..|.||:|..|..:.|.:.:|:...|..|....
  Fly   967 -----NFTRRSKRNITADAPRSHQMLQLLLAMRLTRRDIERFPAAVHLIVAEALEEARLSPPMGC 1026

Mouse   971 SEAVCLLIGRQDLSKQA-------------C-----EGNL-----PRGKSVLSSEVSSGTEAEEE 1012
            |.|...||.|.:|:..|             |     |.:|     |.|    .||..|..:...:
  Fly  1027 SMATYELILRPELAAHAQLPFLETSTGQPHCGRVYKEDSLSARCPPTG----GSETDSPAQLRRD 1087

Mouse  1013 DDGMNDLNHEVMSLIWSEDLRVQDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRT 1077
            |  |::::.:::.|.:.:|:||.:|||||.|::||.:.|.|.|..||||||||:|.:|..||.||
  Fly  1088 D--MDNMDTKLLRLRFPDDMRVDEVRRLLNSSEPVVIEVQQAPGTSDHEFIEEQEKQLFALCSRT 1150

Mouse  1078 MALPVGRGMFTLFSYHPVPTEPLPVPKLNLTGRAPPRNTTVDLNSGNIDVPPNMASWASFHNGVA 1142
            |.||||||||||.:..|.|:|.|.:|||.|.|:.|.:.||:::.  .|:.|.||..|.|||||||
  Fly  1151 MTLPVGRGMFTLRTMLPRPSESLTMPKLCLLGKEPLKGTTIEMQ--QIEFPANMQMWPSFHNGVA 1213

Mouse  1143 AGLKIAPASQ-IDSAWIVYNKPK-HAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTS 1205
            .||||:|.:| |||.|||||||| |:..|.|:|||||||||||||..|:.::::.||.|..|||:
  Fly  1214 TGLKISPQAQDIDSNWIVYNKPKTHSHNALEHAGFLMALGLNGHLKTLSFMSVYKYLVKCDEMTN 1278

Mouse  1206 IGLLLGVSAAKLGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAHRHTA 1270
            :|||||:|||..||||...|:|||:|:.||||.|:.|||:|.:.||||::|:||:|||:|.||.|
  Fly  1279 VGLLLGISAAHRGTMDTKTTKLLSVHLEALLPATAMELDIPQSTQVAAIMGVGLLYQGSAKRHIA 1343

Mouse  1271 EVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQYMVGGHRR 1335
            ||||.|||||||||||...:||||::.|||:||:|.||.|.:..|:.||.:|:.|:.|||||.:|
  Fly  1344 EVLLQEIGRPPGPEMENSIERESYAMTAGLSLGLVTLGQGESPAGLRDLQLPDTLHYYMVGGVKR 1408

Mouse  1336 FQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSIADWLRAPDTMYLLDFVK 1400
            ...|..:||::..|:|::||||:|:|||.|||||||.:::..:.|.:||:|::.||:.||||.|:
  Fly  1409 PIGGSQKEKYRLASFQVREGDTVNIDVTAPGATLALGLMFFNSGNAAIAEWMQPPDSRYLLDMVR 1473

Mouse  1401 PEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIELPCSE--------DLNLETL 1457
            |:||||||::|.||||.|:.|::.|..:..|:.:|      :.::||..|        |::.|.:
  Fly  1474 PDFLLLRTISRGLILWQDVRPDNAWFQAQFPRALR------AHLKLPFYENEYAPEDYDVDYEAI 1532

Mouse  1458 SQAHVYIIAGACLSLGFRFAGSENLSAFSCLHKFAKDFMNYLSAPNASVTGPYNLETCLSVVLLS 1522
            |||:..|:|||...:|.::||:|||.||:.|....|||:.:.|.|.....|...:|:||.|:|:|
  Fly  1533 SQAYCNIMAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPMGECAGRTTVESCLMVLLIS 1597

Mouse  1523 LAMVMAGSGNLKVLQLCRFLHMKTGGE---MNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAAL 1584
            :::|.|||||.::|::.|||..:.|.:   :.||.|:|.||:|||||||.||:::|.:..|||||
  Fly  1598 ISLVFAGSGNCEILRIIRFLRSRVGPQYPHITYGSHMAIHMSLGLLFLGAGRFTISQTPESIAAL 1662

Mouse  1585 LCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKE 1649
            :||.:|.||.||.||||||||||||||||.||||.:|.|:|||..|.|.|.|...|.   .:.:.
  Fly  1663 VCAFFPKFPIHSNDNRYHLQALRHLYVLAVEPRLFLPRDIDTNKLCLANISVLEVGA---TELRR 1724

Mouse  1650 ELMAPTLLPELHLLKQMKVKGPRYWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMG 1714
            ..:||.:||.|..|:|:.|....||.:..:.|:....|...|.....:.:|.|.|.||:.|||..
  Fly  1725 LPIAPCILPVLSTLQQVVVDDENYWPVCFERSRNWDQLEKALEMSAPIDIKKRTGCLSHLEDPDR 1789

Mouse  1715 WQSLLAQTVANRNSEARAFKPETISSFTSDPALLSFAEYFCKPT--VSMGP-----KQEILDLFS 1772
            .:|:||||:....|.........:..|.|:..:..|... |..|  ..:.|     :.:::.|| 
  Fly  1790 LKSMLAQTLTMEQSICWQIDMNDLQQFASERMVKQFLSR-CLDTKGTDLSPPELMKRHQVMLLF- 1852

Mouse  1773 SILYECVAQETPEMLPAYIAM-DQALRSLKKRDMSDTSDLWQIKLILEFFSSRSHQDRQHTYPKR 1836
               |..|.::....||.|:.: |...:|     |.:..|:||:||| :.:.||| |:.:|.    
  Fly  1853 ---YNAVVKDRMHFLPVYLTLYDHVTKS-----MPNNIDVWQMKLI-DAYLSRS-QESEHP---- 1903

Mouse  1837 GLFINSEFLPVVKCTVDATLDQWLQAGGDVC--VHAYLSGQPVEKSQLNMLA--------CFLVY 1891
              .|:.|.:.:::   :....:...:..::|  :..:||.:.::.|.:..::        |.:.|
  Fly  1904 --LISVELIQMMQ---ELFKQEMEDSTRELCLPLREFLSRRRLDPSYVTTVSGPDLQRAFCVINY 1963

Mouse  1892 HSVPAPRHLPPM--GLE---GSTSFAELLYRFRHLKMPVRALLRLAPVL 1935
            :::     ||.|  |::   |:.::..|||.||.|.:....:..|..:|
  Fly  1964 YNL-----LPNMLNGVDLSTGTVNYMRLLYEFRRLNLGAHTIFGLMKIL 2007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Anapc1NP_032595.2 ANAPC1 150..>218 CDD:289618 26/67 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..343 3/30 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..395 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 991..1014 6/27 (22%)
PC 1 1297..1325 13/27 (48%)
PC 2 1366..1404 18/37 (49%)
PC 3 1467..1501 14/33 (42%)
PC_rep 1467..1501 CDD:280095 14/33 (42%)
PC 4 1520..1552 13/34 (38%)
shtdNP_573025.2 ANAPC1 195..298 CDD:289618 39/108 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842690
Domainoid 1 1.000 732 1.000 Domainoid score I106
eggNOG 1 0.900 - - E1_KOG1858
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7414
Inparanoid 1 1.050 1027 1.000 Inparanoid score I276
Isobase 1 0.950 - 0 Normalized mean entropy S5090
OMA 1 1.010 - - QHG46987
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005152
OrthoInspector 1 1.000 - - oto92272
orthoMCL 1 0.900 - - OOG6_102115
Panther 1 1.100 - - LDO PTHR12827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R68
SonicParanoid 1 1.000 - - X3674
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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