DRSC/TRiP Functional Genomics Resources

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Protein Alignment trap-1 and l(1)G0320

DIOPT Version :9

Sequence 1:NP_491076.1 Gene:trap-1 / 171865 WormBaseID:WBGene00022122 Length:257 Species:Caenorhabditis elegans
Sequence 2:NP_001285058.1 Gene:l(1)G0320 / 326234 FlyBaseID:FBgn0028327 Length:302 Species:Drosophila melanogaster


Alignment Length:262 Identity:92/262 - (35%)
Similarity:141/262 - (53%) Gaps:35/262 - (13%)


- Green bases have known domain annotations that are detailed below.


 Worm    18 YAADVVDGEVTD-----------DAPKNSQEDDDLTIGASPDAGLAFHFVQPSDANVVREFYT-- 69
            |||:.|:.::.|           ||  .:.||.|....:||:|.....|.:|        .||  
  Fly    28 YAAEAVEDDLVDVEGEEGAVTGEDA--EADEDSDTGSSSSPNADTYLLFTKP--------LYTPG 82

 Worm    70 -------GKPVKYLIGFQNKGEKDFVVKYAETSFRFPTDHSYHLQNFTRGEYNRRVAPKEEVTLD 127
                   ||||::||||.|||.::||::..|.|||:|.|.:|.:|||:...|||.|.|..|.|:.
  Fly    83 QQLDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVS 147

 Worm   128 YGFYAHETFAGRPVGLVVNVHYQDADGNVFVNNVYNQTINIMEDDSGFSGETGFLFIFFVALSIG 192
            |.|...:.|||||.||.:.:.|:||:|..:...|:|:|:.|.|.|.|..|||.||::....:.:.
  Fly   148 YTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVL 212

 Worm   193 GLYLSNQFL--SKLSRKSGLSKRRVVEQGTS--SEVDFEWIPRDAVKNKEKRSPATVSPKARKSA 253
            .|.:..|:|  |...||...:| :|:|.||:  |.:|::|:|::.::..:|..|.:.:||.....
  Fly   213 LLVIGQQYLLGSSGKRKRAAAK-KVIETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKP 276

 Worm   254 KK 255
            .|
  Fly   277 TK 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trap-1NP_491076.1 TRAP_alpha 16..251 CDD:281839 91/256 (36%)
l(1)G0320NP_001285058.1 TRAP_alpha 4..297 CDD:281839 92/262 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166237
Domainoid 1 1.000 151 1.000 Domainoid score I2693
eggNOG 1 0.900 - - E1_KOG1631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2368
Inparanoid 1 1.050 153 1.000 Inparanoid score I2932
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52580
OrthoDB 1 1.010 - - D1349929at2759
OrthoFinder 1 1.000 - - FOG0005711
OrthoInspector 1 1.000 - - oto18522
orthoMCL 1 0.900 - - OOG6_103262
Panther 1 1.100 - - LDO PTHR12924
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4191
SonicParanoid 1 1.000 - - X5414
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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