DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Matn2 and frac

DIOPT Version :9

Sequence 1:NP_001345709.1 Gene:Matn2 / 17181 MGIID:109613 Length:956 Species:Mus musculus
Sequence 2:NP_001137905.1 Gene:frac / 38850 FlyBaseID:FBgn0035798 Length:1618 Species:Drosophila melanogaster


Alignment Length:575 Identity:173/575 - (30%)
Similarity:251/575 - (43%) Gaps:79/575 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse   149 SEAEGA-----------RPLRENVPRIIMIVTDGRPQDSVAEV---------AAKARNTGILIFA 193
            |..:||           .||.|| |.|..:|.:  |.:...||         |.|..|:|..:.|
  Fly   344 SNCQGACENLPGSYRCVEPLEEN-PEITEVVEN--PIEKTNEVPVNVSESQPAGKTCNSGFQLSA 405

Mouse   194 IGVGQVDLNTLKAIGSEPHKDHVF-------LVANF--SQIESLTSVFQNKLCTVHMCSVLEH-- 247
            .|....|:|..:..|.|...::..       .:.:|  :.:|....:...:.|.:..|:.||:  
  Fly   406 DGTDCQDINECEVDGPEDLDNNAVCQQKCENTIGSFRCTCVEGYHLLEDQRSCALDSCTDLENPQ 470

Mouse   248 ----NCAHFCLNTP-GSYICKCKQGYILSTDQKTCRIQDL-CATEDHGCEQ------LCVNMLGS 300
                .|||.|.:.| |||.|.|.:||.||.||.:|.:|:. |:|| .|.|:      |......|
  Fly   471 LNRTRCAHECQDLPEGSYRCVCPKGYELSEDQHSCLVQESPCSTE-KGVEKCSPGTCLASEDNTS 534

Mouse   301 FVCQCYSGYTLAEDGKRCTAVDYCASENHGCEHECVNAESSYLCRCHEGFALNSDKKTCSKIDYC 365
            |.|.|.:||  ..:...|..:|.||.:.|.|.|.|.|....|.|:|.||..| .::.||...:.|
  Fly   535 FSCICPTGY--RSEAFSCQDIDECAEDTHLCSHTCQNTPGGYQCQCPEGLNL-VEEYTCLAENLC 596

Mouse   366 ASSNHGCQHECVNAQTSALCRCLKGFMLNPDRKTCRRINYCALNKPGCEHECVNTEEGHYCRCRQ 430
            ..:|:||:..|:.|: ..:|.|.:||.|:.|.|:|..::.|.:|..||:..|.|....:.|.|..
  Fly   597 EVNNNGCEQICLTAR-GGVCACREGFRLSADGKSCEDVDECLVNNGGCQQVCRNLPGSYGCICAA 660

Mouse   431 GY---NLDPNGKTCSRVDHCAQQDHGC--EQLCLNTEESFVCQCSEGFLINDD------------ 478
            ||   .||.....|..:|.|:|:.|||  :.||.|...|:.|.|..|:.:..|            
  Fly   661 GYELLKLDGIRGYCFDIDECSQRTHGCSDQMLCENLNGSYTCLCPPGYALGLDNHIVTSLNSSFI 725

Mouse   479 ----------LKTCSRADYCLLSNHGCEYSCVNTDKSFACQCPEGHVLRSDGKTCAKLDSCALGD 533
                      ..||...|.|.|:|..|.:.|.|....|.|.||.|:.|..|.:||..:|.|...:
  Fly   726 TDSTSSETPSAHTCLDIDECSLANGNCSHFCQNEPGGFQCACPLGYALSEDMRTCQDIDECLDSN 790

Mouse   534 HGCEHSCVSSEDSFVCQCFEGYILRDDGKTCRRKDVCQDVNHGCEHLCVNSGESYVCKCLEGFRL 598
            ..|...|::....|.|.|..|:.|..||..|...|.|......|..:|:|...::.|.|..|:.|
  Fly   791 GQCSQLCLNQPGGFACACETGFELTPDGFGCADIDECSQDYGNCSDICINLLGTHACACERGYEL 855

Mouse   599 AEDGKRCRRKNVCKS-TQHGCEHMCVNNGNSYLCRCSEGFVLAEDGKHCKRCTEG 652
            |:|...|...:.|.. ...||.|.|:|...::.|.|..|::|.:||:.|.....|
  Fly   856 AKDKLSCLDVDECAGLLSGGCSHECINKAGTFECGCPLGYILNDDGRSCSPALVG 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Matn2NP_001345709.1 vWA_Matrilin 54..276 CDD:238752 45/162 (28%)
FXa_inhibition 283..318 CDD:317114 12/40 (30%)
FXa_inhibition 324..359 CDD:317114 13/34 (38%)
FXa_inhibition 365..400 CDD:317114 13/34 (38%)
FXa_inhibition 406..441 CDD:317114 12/37 (32%)
vWFA <438..481 CDD:320736 15/66 (23%)
FXa_inhibition 488..523 CDD:317114 13/34 (38%)
vWFA <520..563 CDD:320736 13/42 (31%)
FXa_inhibition 570..605 CDD:317114 10/34 (29%)
vWFA <602..644 CDD:320736 12/42 (29%)
vWFA 652..892 CDD:320736 1/1 (100%)
Matrilin_ccoil 911..953 CDD:313592
fracNP_001137905.1 FXa_inhibition 296..331 CDD:291342
cEGF 396..415 CDD:289433 5/18 (28%)
FXa_inhibition 425..458 CDD:291342 2/32 (6%)
FXa_inhibition 476..505 CDD:291342 16/28 (57%)
vWFA <550..586 CDD:294047 15/36 (42%)
FXa_inhibition 596..630 CDD:291342 13/34 (38%)
FXa_inhibition 636..>664 CDD:291342 10/27 (37%)
EGF_CA 676..715 CDD:284955 14/38 (37%)
FXa_inhibition 745..780 CDD:291342 13/34 (38%)
FXa_inhibition 786..821 CDD:291342 10/34 (29%)
FXa_inhibition 827..862 CDD:291342 10/34 (29%)
FXa_inhibition 874..904 CDD:291342 11/29 (38%)
FXa_inhibition 945..980 CDD:291342
CCP 1110..1170 CDD:153056
CCP 1183..1235 CDD:153056
DUF5011 1468..1536 CDD:295940
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11522
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7043
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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