DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ascl1 and Fer1

DIOPT Version :9

Sequence 1:NP_032579.2 Gene:Ascl1 / 17172 MGIID:96919 Length:231 Species:Mus musculus
Sequence 2:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster


Alignment Length:167 Identity:42/167 - (25%)
Similarity:68/167 - (40%) Gaps:40/167 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    84 QRSSSPELMRCKRRLNFSGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLREHVPNGAANKK 148
            :||..|..::|..:         :.||:.||    |.|||.|::.:|..|..||.|:|.....|:
  Fly    70 RRSHKPRRLKCASQ---------MAQQRQAA----NLRERRRMQSINEAFEGLRTHIPTLPYEKR 121

Mouse   149 MSKVETLRSAVEYIRALQQLLDEHDAVSAAFQAGVLSPTISPNYSND------LNSMAGSPVSS- 206
            :|||:||:.|:.||..|.:::.:.   ....:.|:   ::..||..:      |....|....| 
  Fly   122 LSKVDTLKLAISYITFLSEMVKKD---KNGNEPGL---SLQRNYQKEPPKKIILKDRTGGVAHSL 180

Mouse   207 --------------YSSDEGSYDPLSPEEQELLDFTN 229
                          |:......||..|..|.|..:.|
  Fly   181 SWYRKGDRYPGSKLYARTWTPEDPRGPHSQPLPLYNN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ascl1NP_032579.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..92 3/7 (43%)
HLH 129..171 CDD:197674 16/41 (39%)
Fer1NP_001262334.1 HLH 92..144 CDD:197674 21/51 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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