DRSC/TRiP Functional Genomics Resources

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Protein Alignment Man2b2 and LManII

DIOPT Version :9

Sequence 1:NP_032576.2 Gene:Man2b2 / 17160 MGIID:1195262 Length:1018 Species:Mus musculus
Sequence 2:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster


Alignment Length:1066 Identity:288/1066 - (27%)
Similarity:466/1066 - (43%) Gaps:212/1066 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 WLPL---LGQLL------LLWPRAAQ-------PAGP--IRAFVVPHSHMDVGWVFTVQE----- 47
            ||..   ||.|:      .:.|:|:|       |..|  :...:|.|:|.||||:.||.:     
  Fly     8 WLVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGS 72

Mouse    48 ---SMRAYAANVYTTVVAELVRGGQRRFIAVEQEFFRLWWDGVASEQQ---KQQVRQLLHEGRLE 106
               ..:|....:..:||..|:|..::|||.||..||..||    .||:   ::.|:.|:.:||||
  Fly    73 ETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWW----KEQKPKVQEAVKMLVEQGRLE 133

Mouse   107 FVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGI--RPQFSWHVDPFGASATTPTLFALAGFN 169
            |:.|...|:|||.||....|.|.:.|...|.:|||.  ||:..|.:||||.|....::||..||:
  Fly   134 FIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFD 198

Mouse   170 AHLISRIDYDLKDAMQEAQMLQFVWHGSPSLSGQQEIFTHVMDHYSYCTPSHIPFSNRSGFYWNG 234
            .....|:||..||.....:..:.:||||.:|..:.::|:..: :.:|..|        .||.:: 
  Fly   199 GMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL-YNNYQAP--------DGFCFD- 253

Mouse   235 VAVFPEPPPDGVYP---NMSEPVTGANIHLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNAS 296
            :.....|..||.:.   |:.|.:         :..:...|.::.::||.:::...|.|..:..|.
  Fly   254 ILCNDAPIIDGKHSPDNNVKERI---------DTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQ 309

Mouse   297 VQFDNMDPLLDYINQRTAQ-FGISVQYATLNDYFQALHATNMTWGIRDHQDFLPYSSEPLQAWTG 360
            |.:.|:|.|:.|.|:|.|. ..|::.|:|.:.|.::||...:||..:. .||.||:|:|...|||
  Fly   310 VYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPTKS-DDFFPYASDPHAYWTG 373

Mouse   361 FYTSRSTLKGLARQASALLYAGESMFTRYMWPDPSGTLDPTWALQQLQQLRWAVSEVQHHDAITG 425
            ::|||.|||...|..:..|...:.:..  :.|......||     .|..:|..:..:||||||||
  Fly   374 YFTSRPTLKRFERDGNHFLQVCKQLSA--LAPKKPEEFDP-----HLTFMRETLGIMQHHDAITG 431

Mouse   426 TESPKVKNMYTEHLRMGMLG----VRKLMVSIALGGPPGSGTGAPKDIMGPQVTPVLSVDTRPVG 486
            ||..||...|.:.:.:....    .|..:..:.:.........:.|.:...:...:|::.:.||.
  Fly   432 TEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVS 496

Mouse   487 -----YSASVYNPLAWKITTIITLTVAFPNVSVTDELGHPVSTQI------------QNSTKDPS 534
                 ::.::|||||..:...:.:.|.:.|..:.|..|..:.:|.            :|||   :
  Fly   497 EANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNST---A 558

Mouse   535 AYDLLIL-TTIPGLNYRHYQVMHARGDQAGTRELVAPRANTLKFSLKLRNQPSQEGKRLVPVMND 598
            .|:::.| |.||.|.||.|.|......:..||....|:..:                 .|.|:.:
  Fly   559 KYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSKALPKRTS-----------------SVTVIGN 606

Mouse   599 CYILLFDQDTNMLHSIQDRQSNRTVRMTQEFLEYQANWDVKQGPISDN----------YLFAPN- 652
            .:|.|.......|..:......|.|  :||||.|       :|.:.:|          |:|.|| 
  Fly   607 SHIQLGFDTNGFLSEVTADGLTRLV--SQEFLFY-------EGAVGNNAEFLNRSSGAYIFRPNE 662

Mouse   653 NTAEPSWEAVGMEMVAGTLVTDIRQYFYRYITDQEYIYSIHTRLAHPSLAGELLCQRIEQQYRVG 717
            |....:.:.|.:|:..|.||.::.|.|..:|:....:|:      ..|.|        |.::.||
  Fly   663 NKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVYN------KDSYA--------EFEWLVG 713

Mouse   718 PLDLN----REAILRTSSDLNSQQVLYSDNNGYQMQRRPYK-----AFKSN-PIPRNYYPMVQSA 772
            |:.::    :|.|.|.:||:.|..:..:|:||.:|.:|...     :.|.| .:..||||:....
  Fly   714 PIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPITTKI 778

Mouse   773 FIEDDKSRLVLLAERPHGVSSQGNGQVEVMLHRRLWNNLAWDLKYNLTLNDTS-----IVHPVLW 832
            .:|||.:|:.:|.:|..|.||..:|.:|:|:||||..:.|:.:  ...||:|.     |......
  Fly   779 DVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGV--GEALNETEYGDGLIARGKHH 841

Mouse   833 LMLGPKSTMTALHPRSGVALQHGPVVLLKEL-----------------ADE-ETPVHGPHNPWPV 879
            |..| |||     .|.||:|:  .:..|.:|                 ||| :|......:...:
  Fly   842 LFFG-KST-----DREGVSLK--GIERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISL 898

Mouse   880 TLPPNLHLQILSVPGWTYSRSHAQHLRNLQRGHPEKPQANLQRVLLRLRHLYEAGEDPVLSRPAT 944
            .||..:||  |::..|     |...|                  |:|..|:.|.|||...|:|..
  Fly   899 VLPKPVHL--LTLEPW-----HENQL------------------LVRFEHIMENGEDASYSQPVQ 938

Mouse   945 VDLKVVLRGLGSVVAVEERSLTG-TW 969
            .::|.||... .|..:.|.:|.| .|
  Fly   939 FNVKNVLSAF-DVEGIRETTLDGNAW 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man2b2NP_032576.2 GH38N_AMII_Epman_like 27..352 CDD:212122 104/341 (30%)
Alpha-mann_mid 358..439 CDD:214875 29/80 (36%)
Glyco_hydro_38C 491..1012 CDD:285047 138/537 (26%)
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 89/298 (30%)
Alpha-mann_mid 370..445 CDD:214875 29/81 (36%)
Glyco_hydro_38C 502..957 CDD:285047 135/533 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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