DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Man2b2 and LManI

DIOPT Version :9

Sequence 1:NP_032576.2 Gene:Man2b2 / 17160 MGIID:1195262 Length:1018 Species:Mus musculus
Sequence 2:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster


Alignment Length:1057 Identity:287/1057 - (27%)
Similarity:449/1057 - (42%) Gaps:182/1057 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    27 IRAFVVPHSHMDVGWVFTVQE--------SMRAYAANVYTTVVAELVRGGQRRFIAVEQEFFRLW 83
            |...:|||||.||||:.||.:        ...|....:..|||.||::...||||.||..||..|
  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66

Mouse    84 WDGVASEQQ---KQQVRQLLHEGRLEFVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGI--R 143
            :    |||.   ::.|::|:.:|||||..|...|:|||..|....:.|...|..:|.:|||.  |
  Fly    67 Y----SEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGR 127

Mouse   144 PQFSWHVDPFGASATTPTLFALAGFNAHLISRIDY-DLKDAMQEAQMLQFVWHGSPSLSGQQEIF 207
            |...|.:||||.|....::||...||....:|:|| |.|..|.:.:| :.:|..|.||. ...||
  Fly   128 PTVGWQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEM-EMIWQSSESLK-NSNIF 190

Mouse   208 THVM-DHYSYCTPSHIPFSNRSGFYWNGVAVFPEPPPDG-VYPNMSEPVTGANIHLYAEALVANV 270
            |.:: :|||  .|        .||.:: :.....|..|| .|.|        |:.......:..|
  Fly   191 TGMLYNHYS--AP--------PGFCFD-INCEDAPIIDGESYDN--------NVDARVSEFIDYV 236

Mouse   271 KQRAAWFRTPHVLWPWGCDKQFFNASVQFDNMDPLLDYINQRTAQFG-ISVQYATLNDYFQALHA 334
            |..:..:|:.|::.|.|.|.|:.:|:|.|.|||.|:.|:|.|.:... ::|.|:|.:.|...||.
  Fly   237 KNMSKSYRSTHIMVPMGDDFQYEDAAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQ 301

Mouse   335 TNMTWGIRDHQDFLPYSSEPLQAWTGFYTSRSTLKGLARQASALLYAGESMFTRYMWPDPSGTLD 399
            ...||..:. :||.||||:....|||::|||.|.|...|.       |...|...........|.
  Fly   302 LKQTWPNKT-EDFFPYSSDSHSYWTGYFTSRPTQKRFHRD-------GNHFFQTVKQLSVLANLS 358

Mouse   400 PTWALQQLQQLRWAVSEVQHHDAITGTESPKVKNMYTEHLRMGMLGVRKLMVSIALGGPPGSGTG 464
            .|...:.|..|..|:..:|||||:||||...|.:.|...|...::|... ....||.......:|
  Fly   359 GTQYSEDLDNLSQAMGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGAEN-SARDALRSLTNLTSG 422

Mouse   465 APKDIMGPQVTPVLSVDTRPVGYSASVYNPLAWKITTIITLTVAFPNVSVTDELGHPVSTQIQNS 529
            ..:..:...::..............::.||||...|..:.:.....|..||||.|..|.:::.  
  Fly   423 EFESCLELNISVCAFTQDTANNVIVTLVNPLAHSSTQYVRVPAKNENYIVTDEKGREVFSEVV-- 485

Mouse   530 TKDPSAYDLLILTTIPGLNYRHYQVMHARGDQAGT---RELVAPRANTLKFSLKLRNQPSQEGKR 591
               |..:.:|.|...|. :.:|..|..|..|:...   |.|.:|: |..:..::...:.||:.  
  Fly   486 ---PVPWQVLALEHRPN-DTQHELVFEASVDKIANFLIRVLPSPK-NIAEDQVQFPVERSQDE-- 543

Mouse   592 LVPVMNDCYILLFDQDTNMLHSIQDRQSNRTVRMTQEFLE-YQANWDVKQGPISDNYLFAPNNTA 655
             :.|......|.||..|..|.:::.......::.|....: |:.|....:...|..|:|.|....
  Fly   544 -LTVETSLVKLTFDTTTGGLKTVKMNGFTENIQQTFGIYKGYRGNNGESKNRSSGAYVFRPYGDI 607

Mouse   656 EPSWEAVGMEMVAGTLVTDIRQYFYRYITDQEYIYSIHTRLAHPSLAGELLCQRIEQQYRVGPL- 719
            |.....|.:....||.|.::.|:...:|:....||..              ..|:|.::.|||: 
  Fly   608 EIVNNKVELSFYNGTKVKEVHQHVNEWISQVIRIYED--------------VNRVEFEWLVGPIP 658

Mouse   720 ---DLNREAILRTSSDLNSQQVLYSDNNGYQM------QRRPYKAFKSNPIPRNYYPMVQSAFIE 775
               |:.:|.|.|.||:::|:...|:|:||.::      ||..:....|..|..||||:.....::
  Fly   659 TDDDVGKEIITRFSSNISSKGKFYTDSNGREILERERNQREHFTPDMSEAISGNYYPVTGQISLQ 723

Mouse   776 DDKSRLVLLAERPHGVSSQGNGQVEVMLHRRLWNNLAWDLKYNLTLNDTSIVHPVLWLMLGPKST 840
            ||:.|:.||.:|..|.:|..:|::|:||||||.|:.|:.:  ...||:|                
  Fly   724 DDEKRITLLNDRAQGGTSLKDGELELMLHRRLLNDDAFGV--GEALNET---------------- 770

Mouse   841 MTALHPRSGVAL-QHGPVVLLKELADEETPVHGPHNPWPVTLPPNLHL--QILSVPGWT-YSRSH 901
                  :.|..| ..|.:.|:.:..|.:               ||..|  ..|....|. :|:|:
  Fly   771 ------QYGTGLIARGKIYLILDAVDGK---------------PNQRLLQHQLDQHFWKFFSKSN 814

Mouse   902 --AQHLRNLQR---GHPEKPQANLQRVLLRLRHLYEAGEDPVLSRPATVDLKVVLRGLGSVVA-- 959
              |...||:..   |.||.         :.|..|....:|.:|.|....:.:      |:||:  
  Fly   815 GVASVNRNMIPDFFGIPES---------VELLSLEPYSKDQILIRLENFNTE------GNVVSFN 864

Mouse   960 ------------VEERSLTGTWDVQMLQRWHWSTKTDHLKGHPTS------PPRP--------PG 998
                        :.|.:|.|...::.::|:.::  .|.....|:|      |..|        ..
  Fly   865 IYPLFESLDGYQIWETTLDGNMLLEDVKRFKFA--QDGTGSIPSSVEYYHAPHNPLTANSTMNAS 927

Mouse   999 GSIITVYPKEIRTFFIK 1015
            |.::|:.|.:||||.|:
  Fly   928 GFVVTLVPMQIRTFIIQ 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man2b2NP_032576.2 GH38N_AMII_Epman_like 27..352 CDD:212122 117/341 (34%)
Alpha-mann_mid 358..439 CDD:214875 27/80 (34%)
Glyco_hydro_38C 491..1012 CDD:285047 133/571 (23%)
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 103/298 (35%)
Alpha-mann_mid 323..398 CDD:286360 27/81 (33%)
Glyco_hydro_38C 536..941 CDD:285047 109/477 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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