DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Man2a1 and LManI

DIOPT Version :9

Sequence 1:NP_032575.2 Gene:Man2a1 / 17158 MGIID:104669 Length:1150 Species:Mus musculus
Sequence 2:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster


Alignment Length:1079 Identity:280/1079 - (25%)
Similarity:466/1079 - (43%) Gaps:227/1079 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse   165 LQVFVVPHSHNDPGWLKTFNDYF---RDK-----TQYIFNNMVLKLKEDSSRKFMWSEISYLAKW 221
            :.|.:|||||:|.|||||.:.|:   ::|     .|||.:.:|.:|.:||||:|:..|..:.|||
  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66

Mouse   222 WDIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLEKNLG--VKPRSG 284
            :.......:.|||.|:..|:||...|.|.|.||||.||.:::||...|.::|:...|  .:|..|
  Fly    67 YSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTVG 131

Mouse   285 WAIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAIKKHFSLHKTLEFFWRQNWDLGSATDILCHMMP 349
            |.|||||||..||.:..:..|:.....|:.|..||...|...:|..|:.:..|.: ::|...|: 
  Fly   132 WQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESLKN-SNIFTGML- 194

Mouse   350 FYSYDIPHTCGPDPKICCQFDFKRLP---GGRYGCPWGVPPEAISPGNVQSRAQMLLDQYRKKSK 411
            :..|..|      |..|...:.:..|   |..|            ..||.:|....:|..:..||
  Fly   195 YNHYSAP------PGFCFDINCEDAPIIDGESY------------DNNVDARVSEFIDYVKNMSK 241

Mouse   412 LFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQPHL--KVKIQFGTLSDYFDALEKAV 474
            .:|:..::.|:||||   :|.:..:..:|.::|..|:|.:...  :|.:.:.|.|.|...|.:. 
  Fly   242 SYRSTHIMVPMGDDF---QYEDAAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQL- 302

Mouse   475 AAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRIRAAEILYQLALKQAQ 539
                   :..:|..:.|||.|:.....||:|||||||..||..|......:..:.|..||.....
  Fly   303 -------KQTWPNKTEDFFPYSSDSHSYWTGYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGT 360

Mouse   540 KYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSLNSLEKIIGDSAFL 604
            :|       |.....|::|   :|:.|||||:|||.|..|..||...||:::...|....|:   
  Fly   361 QY-------SEDLDNLSQA---MGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGAENSARDA--- 412

Mouse   605 LILKDKKLYQSDPSKAFLEMDTK--QSSQDSLPQKIIIQLSAQEPRYLVVYNPFEQERHSVVSIR 667
              |:......|...::.||::..  ..:||:....|:           .:.||........|.:.
  Fly   413 --LRSLTNLTSGEFESCLELNISVCAFTQDTANNVIV-----------TLVNPLAHSSTQYVRVP 464

Mouse   668 VNSATVKVLSDSGK-------PVEVQVSAVW---NDMRTISQAAYEVSFLAHIPPLGLKVFKILE 722
            ..:....|..:.|:       ||..||.|:.   ||.:      :|:.|.|.:..:...:.::|.
  Fly   465 AKNENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQ------HELVFEASVDKIANFLIRVLP 523

Mouse   723 SQSSSSHLADYVLYNNDGLAENGI-FHVKNMVDAGDAITIENPFLAIWFDRS--GLME-KVRRKE 783
            |..:              :||:.: |.|:.   :.|.:|:|...:.:.||.:  ||.. |:....
  Fly   524 SPKN--------------IAEDQVQFPVER---SQDELTVETSLVKLTFDTTTGGLKTVKMNGFT 571

Mouse   784 DSRQHELKVQFLWYGTT--NKRDKSGAYLFLPDGQGQPYVSLRPPFVRVTRGRIYSDVTCFLEHV 846
            ::.|....:...:.|..  :|...||||:|.|                      |.|:    |.|
  Fly   572 ENIQQTFGIYKGYRGNNGESKNRSSGAYVFRP----------------------YGDI----EIV 610

Mouse   847 THKVRLYNIQGIEGQSME------VSNIVNIRNVHNR------------------EIVMRISSKI 887
            .:||.|....|.:.:.:.      :|.::.|....||                  ||:.|.||.|
  Fly   611 NNKVELSFYNGTKVKEVHQHVNEWISQVIRIYEDVNRVEFEWLVGPIPTDDDVGKEIITRFSSNI 675

Mouse   888 NNQNRYYTDLNGYQIQPRR---------TMSKLPLQANVYPMCTMAYIQDAEHRLTLLSAQSLGA 943
            :::.::|||.||.:|..|.         .||: .:..|.||:.....:||.|.|:|||:.::.|.
  Fly   676 SSKGKFYTDSNGREILERERNQREHFTPDMSE-AISGNYYPVTGQISLQDDEKRITLLNDRAQGG 739

Mouse   944 SSMASGQIEVFMDRRLMQDDNRGLGQGVHDNKITANLFR-----ILLEKRSAVNMEEEKKSPVSY 1003
            :|:..|::|:.:.|||:.||..|:|:.:::.:....|..     ::|:   ||:.:..::     
  Fly   740 TSLKDGELELMLHRRLLNDDAFGVGEALNETQYGTGLIARGKIYLILD---AVDGKPNQR----- 796

Mouse  1004 PSLLSHMTSSFLNHPFLPMVLSGQLPSPAFELLSEFPLLQSSLPCDIHLVNLRTIQSKMGKGYSD 1068
              ||.|...   .|.:.....|..:.|....::.:|    ..:|..:.|::|        :.||.
  Fly   797 --LLQHQLD---QHFWKFFSKSNGVASVNRNMIPDF----FGIPESVELLSL--------EPYSK 844

Mouse  1069 EAALI----LHRKGFDCQF-------SSRGIGLPCSTTQGKMSV--LKLFNKFAVESL--VPSSL 1118
            :..||    .:.:|....|       |..|..:..:|..|.|.:  :|.| |||.:..  :|||:
  Fly   845 DQILIRLENFNTEGNVVSFNIYPLFESLDGYQIWETTLDGNMLLEDVKRF-KFAQDGTGSIPSSV 908

Mouse  1119 SLMHSPPD------AQNMS--EVSLSPMEISTFRIRLRW 1149
            ...|:|.:      ..|.|  .|:|.||:|.||.|:.::
  Fly   909 EYYHAPHNPLTANSTMNASGFVVTLVPMQIRTFIIQQKY 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man2a1NP_032575.2 PLN02701 127..1148 CDD:178304 280/1076 (26%)
GH38N_Man2A1 164..507 CDD:212131 109/356 (31%)
Alpha-mann_mid 502..587 CDD:214875 32/84 (38%)
Glyco_hydro_38C 757..1143 CDD:285047 107/451 (24%)
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 95/296 (32%)
Alpha-mann_mid 323..398 CDD:286360 32/84 (38%)
Glyco_hydro_38C 536..941 CDD:285047 108/460 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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