DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Man2a1 and LManIII

DIOPT Version :9

Sequence 1:NP_032575.2 Gene:Man2a1 / 17158 MGIID:104669 Length:1150 Species:Mus musculus
Sequence 2:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster


Alignment Length:1102 Identity:273/1102 - (24%)
Similarity:454/1102 - (41%) Gaps:236/1102 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse   155 YEA-DEWDHEPLQVFVVPHSHNDPGWLKTFNDYFRDK--------TQYIFNNMVLKLKEDSSRKF 210
            ||: .|.....:.:.:|||||:|.|||||.:.|:...        .||||:.:|.:|.:||.|:|
  Fly    26 YESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQHAGVQYIFDTVVAELSKDSRRRF 90

Mouse   211 MWSEISYLAKWWDIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLEK 275
            :..|..:.||||:.....||:.||:|:..|:||...|.|.|.|||..:|.::|||...|.::|..
  Fly    91 IQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFAVGLKFLND 155

Mouse   276 NLGV--KPRSGWAIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAIKKHFSLHKTLEFFWRQNWDLG 338
            |.||  :||.||.||.||||...|.:..:..|......|:....|.....:..||..|       
  Fly   156 NFGVCGRPRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNLGLEMVW------- 213

Mouse   339 SATDILCHMMPFYSYDIPHTCGPDPKIC----CQFDFKRLPGGRYGCPWGVPPEAISPGNVQSRA 399
            .|::.|..|..|......|...| |..|    || |...:.|..|            ..||:||.
  Fly   214 DASETLEEMDFFTGMLYNHYSAP-PGFCFDSLCQ-DDPIIDGKSY------------DNNVKSRV 264

Mouse   400 QMLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQ--PHLKVKIQFGT 462
            ...|:.....:..:|:..::.|:||||   :|....:..:|.::|..|:|.:  ...|..|.:.|
  Fly   265 DDFLNYASNLAGYYRSNHIMVPMGDDF---QYENAYMNYKNMDKLIKYVNERQASGSKYNIFYST 326

Mouse   463 LSDYFDALEKAVAAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRIRAA 527
            ...|.::|.|::.:        ||..:.||..::.....:|:|:|||||..||.:|.....::.|
  Fly   327 AGCYLNSLHKSLQS--------FPNKTQDFLPHSHEAKSFWTGFFTSRPTQKRFERDGNHILQVA 383

Mouse   528 EILYQLA-LKQAQKYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSL 591
            :.|..|| |...:::|...:|           |:.:.:.|||||||||.|..|..||...|:.::
  Fly   384 KQLSVLADLSGEEQHKDLDYL-----------RQIMAVMQHHDAITGTEKQEVSNDYDRLLYDAI 437

Mouse   592 NSLEKIIGDSAFLLILKDKKLYQSDPSKAFLEMD------TKQSSQDSLPQKIIIQLSAQEPRYL 650
            ........|:..:|..:....:||     .|:::      ||:::.|.:               :
  Fly   438 LGGANTARDALRVLTNQPNGEFQS-----CLKLNISECAFTKENADDFM---------------V 482

Mouse   651 VVYNPFEQERHSVVSIRVNSATVKVLSDSGKPVEVQVSAV-WN----DMRTISQAAYEVSFLAHI 710
            .:|||........|.:.|...:.:|..:.|..|..::..| |.    :.|. :...:|:.|.|.:
  Fly   483 TLYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEFRN-NDTQHELVFKASV 546

Mouse   711 PPLGL----------------------------------KVFKILESQSSSSHLADYVLYNNDGL 741
            ..:..                                  |.||.:.|..:.....|    :.:.:
  Fly   547 NKIATYFIKKIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLD----DQETI 607

Mouse   742 AENGIFHVKNMVD--AGDAITIENPFLAIWFDRSGLMEKVRRKEDSRQHELKVQFLWYGTTNKRD 804
            .:|.:  :|.::|  .|...|:|         .:|:.|           ::...|..|.|.    
  Fly   608 VQNSL--IKLVIDNNTGRLKTVE---------MNGVSE-----------DIDQTFGMYKTA---- 646

Mouse   805 KSGAYLFLPDGQGQPYVSLRPPF-VRVTRGRIYSDVTCFL-EHVTHKVRLYNIQGIEGQSME-VS 866
            :|..|:|..|...:   .:...| ..|..|....:|...: |.::..:|:|  :|:.....| :.
  Fly   647 RSCHYIFRQDADLE---LVEDAFDFTVYDGESVKEVHQHVNEWISQVIRIY--EGVNRVEFEWLV 706

Mouse   867 NIVNIRNVHNREIVMRISSKINNQNRYYTDLNGYQIQPRR---------TMSKLPLQANVYPMCT 922
            ..|.|.:...:|||....|.|::...:|||.||.::..|.         .:|:.|:..|.||:.:
  Fly   707 GPVPIDDELGKEIVTIFKSGISSGGVFYTDSNGREMMRREKDKREDFSPDLSEQPVSGNYYPVTS 771

Mouse   923 MAYIQDAEHRLTLLSAQSLGASSMASGQIEVFMDRRLMQDDNRGLGQGVHDNKITANLF---RIL 984
            ...:||:..|:.||:.:|.|.:|:..|::|:.:.||.:..|..|..:.:::.:....|.   ::.
  Fly   772 RMALQDSSKRMVLLNDRSQGGASLEDGRLEMMLHRRHIFADGSGAAEAINEQQFGKGLIARGKLF 836

Mouse   985 L------EKRSAVNMEEEKKSPVSYPSLLSHMTSSFLNHPFLPMVLSGQLPSPAFELLSEFPLLQ 1043
            |      :..:|.....||:..:.:....|.               |..:.|...:.||:|    
  Fly   837 LYLNAIEDGATASERVAEKEIHLPFWKFFSK---------------SNNIQSDVTKTLSDF---- 882

Mouse  1044 SSLPCDIHLVNLRTIQSKMGKGYS-DEAALILHR-----KGFDCQFSSR-------GIGLPCSTT 1095
            :.||..:||:.|        :.|| ||..|.|..     :|....||.|       |:.:..:|.
  Fly   883 NDLPQSVHLLTL--------EPYSKDEILLRLENFLDQTEGNVVSFSIRQIFDDLGGLEIRETTL 939

Mouse  1096 QGK-----MSVLKLFNKFAVES-LVPSSLSLMHSPPDA---QNMSE--VSLSPMEISTFRIR 1146
            .|.     |..||..:..:..| .||...:.:|.|..|   |:.||  |:|.||:|.||.|:
  Fly   940 DGNLPLSDMKRLKFHHDGSGPSHSVPEYFTSLHKPLAADKTQDASEFSVTLKPMQIRTFIIK 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man2a1NP_032575.2 PLN02701 127..1148 CDD:178304 273/1102 (25%)
GH38N_Man2A1 164..507 CDD:212131 108/358 (30%)
Alpha-mann_mid 502..587 CDD:214875 31/85 (36%)
Glyco_hydro_38C 757..1143 CDD:285047 98/430 (23%)
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 95/297 (32%)
Alpha-mann_mid 358..433 CDD:286360 31/85 (36%)
Glyco_hydro_38C 603..998 CDD:285047 102/452 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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