DRSC/TRiP Functional Genomics Resources

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Protein Alignment Man1a and alpha-Man-Ib

DIOPT Version :9

Sequence 1:XP_006512631.1 Gene:Man1a / 17155 MGIID:104677 Length:746 Species:Mus musculus
Sequence 2:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster


Alignment Length:714 Identity:219/714 - (30%)
Similarity:349/714 - (48%) Gaps:106/714 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    92 MPVGGLLPLFSSPGGGGLGSGLGGGLGGGRKGSGPAAFRL--TEKFVLLLVFSAF---ITLCFGA 151
            |..||.:.|...||......      ..|||....|..:|  .::.:::|..:.|   :.||...
  Fly     1 MKDGGHITLTLPPGSAATTD------ERGRKSLRRAWNQLPRCQRNLIILGITGFCVTVLLCLSG 59

Mouse   152 IFFLPDSSK---LLSGVLFHSNPALQPPAEHKPGLGARA-EDAAEGRVRHREEGAPGDPGA---- 208
            ...|..|.|   ..:.|..:..|.  |...|.||:.... :|.|...|       |.|..|    
  Fly    60 DQLLAASLKDVDTKAEVAAYQMPL--PNPHHHPGVDKDVPKDTAAVPV-------PADKRAPRVE 115

Mouse   209 GLEDNLARIRENHERALREAK--ETLQKLPEEIQRDILLEKEKVA-----QDQLRDKDLFRGLPK 266
            .:.|..     |...|..||.  |.:.:|||.:..:.|.:...:|     .|..:::|    :..
  Fly   116 AVSDKF-----NELVAYGEANSAENVARLPETVAAEGLPQASAMAVALPPPDSNKEQD----IGG 171

Mouse   267 VDFL----PPVGVENREP-----------------ADATIREKRAKIKEMMT------------- 297
            :|.|    .||..:..||                 ...:.:|...|||.::.             
  Fly   172 IDILNNVEEPVAQDPAEPLSEGEQLEQAIKNPLTLGGVSFKEHLKKIKPILAKGQHFHGATNERQ 236

Mouse   298 --------HAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKTEFQEAK 354
                    |:|..||:||||.:.|||||:..|  ..||  .|.||||:|||::|||:..||:|.:
  Fly   237 SAVVAAFKHSWAGYKKYAWGHDNLKPISQYSH--EWFG--LGLTIVDSLDTMYIMGLDDEFKEGR 297

Mouse   355 SWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWAL 419
            .|:::.|.|:...:|::|||.||.:|||||||:|||:.:|..||.|||.:|||||.:||.||::.
  Fly   298 DWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAELGNRLLPAFQSPSNIPYSD 362

Mouse   420 LNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYP 484
            :|:......:..|:...|:  :|..|:.|||..||..:...::.:...|:...::.|:|..||.|
  Fly   363 VNLGDLSAHSPKWSPDSST--SEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHGLVP 425

Mouse   485 NYLNPSSGQWGQH-HVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKM-YFDAVQAIETHLIRKS-S 546
            .::|.::|.:..: .:|:|..|||:||||||.|:.:.:.|.:...: |..||..:.|.|:|:: .
  Fly   426 IFINANTGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPR 490

Mouse   547 GGLTYIAEWKGGL-LEHKMGHLTCFAGGMFALG-ADGAPEARAQHYLELGAEIARTCHESYNRTY 609
            ....||.|...|. .:.||.||||:..|...|| .:|.|::    :|.|..::..||:::|....
  Fly   491 EHWVYIGELINGKDFKPKMDHLTCYLPGTLILGHQNGMPDS----HLILARDLLDTCYQTYMMNP 551

Mouse   610 VKLGPEAFRF---DGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESH 671
            ..|..|...|   :...:.|..:.|:.:.:||||.:|:..|.:.:|.:..|:...|:..:|.|:|
  Fly   552 THLAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAFETH 616

Mouse   672 CRVNGGYSGLRDVYIARES-YDDVQQSFFLAETLKYLYLIFSDD-DLLPLEHWIFNTEAHPFPI 733
            .:||.||:.:.:|...:.: ..|:.:||:::|||||.||:|||| ..:.||.|:||:|.||.|:
  Fly   617 AKVNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEIDLEQWVFNSEGHPLPV 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Man1aXP_006512631.1 SdhA <178..305 CDD:393461 35/180 (19%)
Glyco_hydro_47 295..733 CDD:366693 165/468 (35%)
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 165/447 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R728
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.860

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