DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPTSSA and CG34293

DIOPT Version :10

Sequence 1:NP_612145.2 Gene:SPTSSA / 171546 HGNCID:20361 Length:71 Species:Homo sapiens
Sequence 2:NP_001097945.1 Gene:CG34293 / 5740555 FlyBaseID:FBgn0085322 Length:84 Species:Drosophila melanogaster


Alignment Length:50 Identity:15/50 - (30%)
Similarity:33/50 - (66%) Gaps:0/50 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    17 YYQYLLVTALYMLEPWERTVFNSMLVSIVGMALYTGYVFMPQHIMAILHY 66
            |.||.|||.:.||||||:.:.|...:.::.:.|::.::::|.::..::.:
  Fly    12 YRQYELVTCVNMLEPWEKKLINGFFLVMLLLVLFSSFMYLPNYMQTLMQF 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTSSANP_612145.2 SPT_ssu-like 10..63 CDD:463347 15/45 (33%)
CG34293NP_001097945.1 SPT_ssu-like 5..58 CDD:463347 15/45 (33%)

Return to query results.
Submit another query.