DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg3a and lectin-22C

DIOPT Version :10

Sequence 1:NP_742074.2 Gene:Reg3a / 171162 RGDID:621401 Length:174 Species:Rattus norvegicus
Sequence 2:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster


Alignment Length:165 Identity:37/165 - (22%)
Similarity:59/165 - (35%) Gaps:49/165 - (29%)


- Green bases have known domain annotations that are detailed below.


  Rat    29 QKAVPSTRTSC------PMGSKAYRSYCYTLVTTLKSWFQADLACQKRPSGHLVSILSGGEASFV 87
            :|.|...:|..      .:|||    |.|....:.|:|..|...| :...|||..|..  ||...
  Fly   124 EKTVLEVKTKIKYLGFEQIGSK----YYYIEKVSEKNWSTASKTC-RNMGGHLADIKD--EADLA 181

  Rat    88 SSLVTGRVNNNQDIWIGLHD----------PTMGQQPNGGGWEWSNSDVLNYLNWDGDPSSTVNR 142
            :  :...:..:...|:|::|          || |:|             ..:|.|.....|.::.
  Fly   182 A--IKANLKEDTHYWLGINDLDHEGKFLSMPT-GKQ-------------TTFLKWASGRPSQLDT 230

  Rat   143 GNCGSLTATSEFLKWG---DHHCDVELPFVCKFKQ 174
            .||       .||..|   |:.|.....|:|:.::
  Fly   231 LNC-------VFLYNGEMYDYPCHYTFRFICQTEE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg3aNP_742074.2 CLECT 39..172 CDD:470576 34/151 (23%)
Sufficient to activate EXTL3. /evidence=ECO:0000250|UniProtKB:Q06141 102..117 7/24 (29%)
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 30/134 (22%)

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