DRSC/TRiP Functional Genomics Resources

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Protein Alignment Timm9 and Tim9b

DIOPT Version :9

Sequence 1:NP_001263358.1 Gene:Timm9 / 171139 RGDID:621656 Length:89 Species:Rattus norvegicus
Sequence 2:NP_001027074.1 Gene:Tim9b / 3772213 FlyBaseID:FBgn0027358 Length:117 Species:Drosophila melanogaster


Alignment Length:53 Identity:17/53 - (32%)
Similarity:30/53 - (56%) Gaps:0/53 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat    11 IKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEEVTCSEHCLQKYLKMTQRI 63
            ::..|:|...|||:||.||..||.:.:.|::...|..|.:.|:.|:.:..|.:
  Fly     5 LRNLKDFFTLYNKVTELCFSRCVDNLSQRDLGGHEDLCVDRCVTKFARFNQNM 57

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Timm9NP_001263358.1 zf-Tim10_DDP 10..67 CDD:397210 17/53 (32%)
Twin CX3C motif 28..52 7/23 (30%)
Tim9bNP_001027074.1 zf-Tim10_DDP 4..61 CDD:281019 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3479
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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