DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp99c

DIOPT Version :9

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_651711.1 Gene:Obp99c / 43494 FlyBaseID:FBgn0039682 Length:151 Species:Drosophila melanogaster


Alignment Length:142 Identity:26/142 - (18%)
Similarity:50/142 - (35%) Gaps:34/142 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PPNGTE-NKLSQEMLRACMRRTEISMSQLKLFHMSLMNSDYNNDNDIAPTPVQSIGDVNNLGDLD 116
            |..|.| .|:..:    |::...:|..|:.    .|.|..:.|:.|:......|...:....|  
  Fly    22 PKTGEEIRKIRVD----CLKENPLSNDQIS----QLKNLIFPNEPDVRQYLTCSAIKLGIFCD-- 76

  Fly   117 FNGNSQMPY----------LDLKHNEPLQCFVSCLYETLDLDRYNV--------LLEEAFKNQVQ 163
                 |..|          :||...|.||...||:.:....:..:|        ::.....::|:
  Fly    77 -----QQGYHADRLAKQFKMDLSEEEALQIAQSCVDDNAQKNPTDVWAFRGHQCMMASKIGDKVR 136

  Fly   164 TIIQHEKAEIKE 175
            ..::.:..|.|:
  Fly   137 AFVKAKAEEAKK 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 12/69 (17%)
Obp99cNP_651711.1 PBP_GOBP 17..128 CDD:279703 23/120 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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