DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp57c

DIOPT Version :9

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_611481.1 Gene:Obp57c / 37311 FlyBaseID:FBgn0034509 Length:149 Species:Drosophila melanogaster


Alignment Length:147 Identity:33/147 - (22%)
Similarity:62/147 - (42%) Gaps:14/147 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ISMSQLKLFHMSLMNSDYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVS 139
            :|:..|.|...:...||....|:|:....|.:.|.|:..:.|.. |:...|         :||:.
  Fly    15 VSIQSLSLLEETNYVSDCLASNNISQAEFQELIDRNSSEEDDLE-NTDRRY---------KCFIH 69

  Fly   140 CLYETLDLDRYNVLLEEAFKNQVQTIIQHEKAEIKECSDL--QGKTRCEAAYKLHLCYNHLKTLE 202
            ||.|..:|...|..|:....:|::.:....:..:.:|..:  :.:..||.|:|:..|..  ::.|
  Fly    70 CLAEKGNLLDTNGYLDVDKIDQIEPVSDELREILYDCKKIYDEEEDHCEYAFKMVTCLT--ESFE 132

  Fly   203 AEQRIREILERTEAENE 219
            ....:.|..:.|...||
  Fly   133 QSDEVTEAGKNTNKLNE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 15/71 (21%)
Obp57cNP_611481.1 PhBP 28..131 CDD:214783 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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