DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp56d

DIOPT Version :9

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001286619.1 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:90 Identity:20/90 - (22%)
Similarity:33/90 - (36%) Gaps:28/90 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 NGNSQMPYLDLKHNEP-LQCFVSCLYETLDLDRYNVLLEEAFKNQVQTII-----------QHEK 170
            |||       ...::| ::||.:|..|.:..         ....:||..:           ...|
  Fly    51 NGN-------FDDSDPKVKCFANCFLEKIGF---------LINGEVQPDVVLAKLGPLAGEDAVK 99

  Fly   171 AEIKECSDLQGKTRCEAAYKLHLCY 195
            |...:|...:|..:|:.||:|..||
  Fly   100 AVQAKCDATKGADKCDTAYQLFECY 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 15/81 (19%)
Obp56dNP_001286619.1 PBP_GOBP 19..127 CDD:279703 20/90 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006711
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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