DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp56a

DIOPT Version :9

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:180 Identity:34/180 - (18%)
Similarity:71/180 - (39%) Gaps:57/180 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FFIFYIS---FTRSLSVSLNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQLKLFHMSL 87
            :|:..:|   .|.::..|||:|           ..:..|:::....|....:::..:     .:.
  Fly     4 YFVIALSALFVTLAVGSSLNLS-----------DEQKDLAKQHREQCAEEVKLTEEE-----KAK 52

  Fly    88 MNS-DYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDLDRYN 151
            :|: |:||     ||                              |.::||.:|.:|.:...:..
  Fly    53 VNAKDFNN-----PT------------------------------ENIKCFANCFFEKVGTLKDG 82

  Fly   152 VLLEEAFKNQVQTIIQHE--KAEIKECSDLQGKTRCEAAYKLHLCYNHLK 199
            .|.|.....::..:|..|  ||.:::|..::|:.:|:.|.||:.|:...|
  Fly    83 ELQESVVLEKLGALIGEEKTKAALEKCRTIKGENKCDTASKLYDCFESFK 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 17/71 (24%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 26/154 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006711
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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