DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp28a

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster


Alignment Length:141 Identity:29/141 - (20%)
Similarity:51/141 - (36%) Gaps:41/141 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VQSIGDVNNLGDLDFNGNSQMPYL-----DLKH---NEPL-----QCFVSCLYETLD-LDRYNVL 153
            |::..:...|..|..:..|.||.:     ||:.   .:|.     :|..:|:.:.:. ||....|
  Fly    19 VRAFDEKEALAKLMESAESCMPEVGATDADLQEMVKKQPASTYAGKCLRACVMKNIGILDANGKL 83

  Fly   154 LEEAFKNQVQTIIQHEKAEIKECSDLQGKT---------RCEAAYKLHLCYNHLKTLEAEQRIRE 209
            ..||...:.:....::.|::|...:: |.|         .||||.....|:              
  Fly    84 DTEAGHEKAKQYTGNDPAKLKIALEI-GDTCAAITVPDDHCEAAEAYGTCF-------------- 133

  Fly   210 ILERTEAENEG 220
               |.||:..|
  Fly   134 ---RGEAKKHG 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 16/78 (21%)
Obp28aNP_523505.1 PBP_GOBP 24..134 CDD:460193 24/127 (19%)

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