DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp19b

DIOPT Version :9

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster


Alignment Length:182 Identity:39/182 - (21%)
Similarity:70/182 - (38%) Gaps:53/182 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MLRACMRRTEISMSQLKL---FHMSLMNSDYNNDNDIAPTP------VQSIGDV-------NNLG 113
            |::.....|.:.|:.|.|   ....||.|...::.:.:.|.      ::..||.       .|:.
  Fly     1 MMQCSRMTTTLKMTNLLLAVACAAVLMGSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIV 65

  Fly   114 DLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL--------------DRYNVLL---EEAFKNQ 161
            ::..|..      |.||.  .:||..|:.|..:|              |..|::.   |:..:..
  Fly    66 EMVLNKE------DAKHE--TKCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMFPDREDDGRRI 122

  Fly   162 VQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLCYNHLKTLEAEQ-RIREILE 212
            |:|..:..|||         :.:||||:.:.:|.  |:.:.:.. :|.||.|
  Fly   123 VKTCNEELKAE---------QDKCEAAHGIAMCM--LREMRSSGFKIPEIKE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 20/86 (23%)
Obp19bNP_608391.2 PBP_GOBP 38..150 CDD:279703 27/130 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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