DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp56f

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster


Alignment Length:148 Identity:28/148 - (18%)
Similarity:54/148 - (36%) Gaps:58/148 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SQEMLRACMRRTEISMSQLKLFHMSLMNSDYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYL 126
            |.|.::||::|        :|.:....|:.::...|    .:||                     
  Fly    22 SSEKIKACLKR--------QLGYTITENTKFDAKED----SLQS--------------------- 53

  Fly   127 DLKHNEPLQCFVSCLYETLDLDRYNVLLEEAFKN-QVQTIIQH----------EKAEIKECSDLQ 180
                    :||..||.|.     ..|:..:|..: |.:.:::.          |||| ::|..::
  Fly    54 --------KCFYHCLLEV-----KGVIANDAISSEQPRKVLEKKYGITDTDELEKAE-EKCHSIK 104

  Fly   181 GKTRCEAAYKLHLCYNHL 198
            ...:||..|::..||..:
  Fly   105 ASGKCELGYEILKCYQSI 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 16/74 (22%)
Obp56fNP_725926.1 PBP_GOBP <49..120 CDD:460193 20/109 (18%)

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