DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif2 and Krtap4-7

DIOPT Version :9

Sequence 1:NP_731093.2 Gene:Pif2 / 170876 FlyBaseID:FBgn0046873 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_083889.1 Gene:Krtap4-7 / 76444 MGIID:1923694 Length:168 Species:Mus musculus


Alignment Length:144 Identity:73/144 - (50%)
Similarity:79/144 - (54%) Gaps:29/144 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCSPCCGSCCGP------CCSP-CC-SPCC-PPCCND-CC-GSCCSP-CC-GPCCSP-CCGP-CC 50
            |.|.||||.|..      ||.| || |.|| |.||.. || .:||.| || ..||.| ||.| ||
Mouse     1 MVSSCCGSVCSEEGCSQGCCQPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSCCRPSCCRPSCC 65

  Fly    51 SP-CC-SPCCTP-CC-TPCCTP-CCK--CCTP-CCV-PCCTPCC--TPCC-TPCCTPCCSPCCGP 103
            .| || |.||.| || :.||.| ||:  ||.| ||: .||.|.|  :.|| :.||.|||.|||.|
Mouse    66 RPSCCVSSCCRPQCCQSACCQPTCCRPSCCRPSCCISSCCQPSCGGSSCCGSSCCRPCCRPCCRP 130

  Fly   104 CCSPCCSPCGGSKC 117
            ||  |..|..|..|
Mouse   131 CC--CLRPVCGQVC 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif2NP_731093.2 None
Krtap4-7NP_083889.1 Keratin_B2 3..167 CDD:279797 72/142 (51%)
Keratin_B2_2 3..48 CDD:290596 21/44 (48%)
Keratin_B2_2 29..73 CDD:290596 23/43 (53%)
Keratin_B2_2 54..98 CDD:290596 24/43 (56%)
Keratin_B2_2 84..160 CDD:290596 31/61 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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