DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif2 and Krtap4-1

DIOPT Version :9

Sequence 1:NP_731093.2 Gene:Pif2 / 170876 FlyBaseID:FBgn0046873 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_001041661.1 Gene:Krtap4-1 / 665891 MGIID:3622079 Length:169 Species:Mus musculus


Alignment Length:144 Identity:74/144 - (51%)
Similarity:80/144 - (55%) Gaps:29/144 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCSPCCGSCCGP------CCSP------CC-SPCCPPCCNDCCGSCCSP-CC-GPCCSP-CCGP- 48
            |.:.||||.|..      ||.|      || :.||.|.|  |..|||.| || ..||.| ||.| 
Mouse     1 MVNSCCGSVCSEESCGQGCCQPSCCQTTCCRTTCCRPSC--CVSSCCRPSCCVSSCCRPSCCRPQ 63

  Fly    49 CC-SPCCSP-CCTP-CC-TPCCTPCC---KCC-TPCCVPCCTPCCTPCCTPCCTPCCSPCCGPCC 105
            || |.||.| ||.| || :.||.|.|   .|| :.||.|||.|||:|||:|||.|||.|||.|||
Mouse    64 CCQSVCCQPTCCRPSCCISSCCRPSCGSSSCCGSSCCRPCCRPCCSPCCSPCCRPCCRPCCRPCC 128

  Fly   106 SPCC--SPCGGSKC 117
            .|||  .|..|..|
Mouse   129 RPCCCLRPVCGQVC 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif2NP_731093.2 None
Krtap4-1NP_001041661.1 Keratin_B2 38..168 CDD:279797 60/107 (56%)
Keratin_B2_2 39..80 CDD:290596 23/42 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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