DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snrk and par-1

DIOPT Version :9

Sequence 1:NP_620188.1 Gene:Snrk / 170837 RGDID:69653 Length:746 Species:Rattus norvegicus
Sequence 2:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster


Alignment Length:645 Identity:191/645 - (29%)
Similarity:293/645 - (45%) Gaps:130/645 - (20%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 GLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRL 78
            |.|.|.||:|:|:||.||||:|:.||::||:|:||||:|:..:...||:|||.||::.|||||:|
  Fly   251 GKYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKL 315

  Rat    79 YEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPE 143
            ::||:|:..||||:|...||::|||::.|.. :.|..|:..|.|||.|:.|||:..::|||||.|
  Fly   316 FQVIETEKTLYLIMEYASGGEVFDYLVLHGR-MKEKEARVKFRQIVSAVQYCHQKRIIHRDLKAE 379

  Rat   144 NVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVILFML 208
            |:: .:.:..:|:.||||||:|.||.||.|.|||..|:|||:..|.:||.|.||:|||||||:.|
  Fly   380 NLL-LDSELNIKIADFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 443

  Rat   209 VCGQPPFQEANDSETLTMIMDCKYTVPPRVSAGCRDLITRMLQRDPKRRASLEEIESHPWLQGVD 273
            |.|..||..:...|....::..||.:|..:|..|.:|:.:.|..:|.:|||||.|....|:.   
  Fly   444 VSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWMN--- 505

  Rat   274 PSPATKYNIPLVSYKNLSEEEHNSIIQRMVLGDIAD-------------RDAIVEALETNRYNHI 325
                          ....|:|....|:..  .|:||             |..|..:|...||:.:
  Fly   506 --------------MGFEEDELKPYIEPK--ADLADPKRIEALVAMGYNRSEIEASLSQVRYDDV 554

  Rat   326 TATYFLLAERILREKQEKEIQTRSASPSNIKAQFR---------QSWPTKIDVPQDLEDDLTATP 381
            .|||.||..:....:.:......|.|..||.....         || ||...|.:.:....| .|
  Fly   555 FATYLLLGRKSTDPESDGSRSGSSLSLRNISGNDAGANAGSASVQS-PTHRGVHRSISASST-KP 617

  Rat   382 LSHATVPQSPARAGDSVLNGHRSKGLCDPAKKDELPELAGPAL------------STVPPASLK- 433
            ...|:....|..|..:|.....:.|..:|:..   ...||.|.            :|:..|::| 
  Fly   618 SRRASSGVGPTNAAATVAAATGAVGAVNPSNN---YNAAGSAADRASVGSNFKRQNTIDSATIKE 679

  Rat   434 -----------PAASGRKCLFRVE-----------EDEEEDEEDKKPVSLSTQVVLRRKPSVTNR 476
                       ||::.:|.|...:           ..:.:.....:.||.::.::.||..::..:
  Fly   680 NTARLAAQNQRPASATQKMLTTADTTLNSPAKPRTATKYDPTNGNRTVSGTSGIIPRRSTTLYEK 744

  Rat   477 LTSRKSAPVLNQIFEEGESDDEFDMDENLPPKLSRLKM------------NIASPGTVHKRYHRR 529
            .:|.:...|:             ..:.||   ..||:|            |:.|..|.|....|.
  Fly   745 TSSTEKTNVI-------------PAETNL---FDRLRMASAVKSSRHFPRNVPSRSTFHSGQTRA 793

  Rat   530 KSQGRGSSCSSSETSDDDSE--------------SRRRLDKDSG-----LAYSWHRRDSS 570
            ::........:|..|.|.|.              |:|....|..     |.::|..:.:|
  Fly   794 RNNTALEYSGTSGASGDSSHPGRMSFFSKLSSRFSKRPTIADEAAKPRVLRFTWSMKTTS 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnrkNP_620188.1 STKc_SNRK 12..269 CDD:270976 121/254 (48%)
UBA_SNRK 288..335 CDD:270524 16/59 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..414 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 494..638 20/108 (19%)
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 120/253 (47%)
S_TKc 253..504 CDD:214567 120/252 (48%)
UBA_MARK_Par1 525..563 CDD:270522 11/37 (30%)
MARK1-3_C 839..936 CDD:213381 3/15 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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