DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kirrel and Dscam2

DIOPT Version :9

Sequence 1:XP_011238330.1 Gene:Kirrel / 170643 MGIID:1891396 Length:805 Species:Mus musculus
Sequence 2:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster


Alignment Length:705 Identity:166/705 - (23%)
Similarity:254/705 - (36%) Gaps:168/705 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    61 DQTVVAGQRAVLPCVLL-NYSGIVQWTKDGLALGMGQGLKAWPRYRVVGSADAGQY--------- 115
            :||:..|....|.|... |.:..:.||.||..|...            |....|||         
  Fly   431 EQTLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSN------------GRFMIGQYITVHGDVIS 483

Mouse   116 NLEITDAELSDDASYECQATEAALR-SRRAKLTVLIPPEETRIDGGPVILLQAGTPYNLTCRAFN 179
            ::.|:...:.|...|.|.|...|.| ...|:|.:...|....|   |.:...:|...||.| ...
  Fly   484 HVNISHVMVEDGGEYACIAENRAGRVQHAARLNIYGLPYIRLI---PKVTAVSGETLNLKC-PVA 544

Mouse   180 AKPAATIIWFRDG----------TQQEGAVTSTELLKDGKRETTISQLLIEPTDLDIGRVFTCRS 234
            ..|...|.|.|.|          .|.:|::|.:.:.|:.                |.| |:||.:
  Fly   545 GYPIEEIHWERGGRELPDDIRQRVQPDGSLTISPVQKNS----------------DSG-VYTCWA 592

Mouse   235 MNEAIPNGKETSIELDVHHPPTVTLSIEPQTVLE---GERVIFTCQATANPEILGYRWAKGGFLI 296
            .|:...:.:.:. |:.|..||  .||.....:|:   |:|...||........|...|.|.|..|
  Fly   593 RNKQGHSARRSG-EVTVIVPP--KLSPFQTNILQLNMGDRASLTCSVVKGDLPLTINWRKDGRPI 654

Mouse   297 EDAHESRYETNVDY----------SFFTEPVSCEVYNKVGSTNVSTLVNVHFAPRIVVYPKPTTT 351
            :.......:....|          |..|...||.|.|.......|..:.|:..||.:|.|.....
  Fly   655 DPTQHMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQALLVNVPPRWIVEPVDANV 719

Mouse   352 DIGSDVTLTCVWVGNPPLTLTWTKKDSNMGPRLPGSPPEANLS--AQVLSNSNQLLLKSVTQADA 414
            :....:.|.|...|.|..::.|.|...:..    |...|....  .::|.|.: |||:.|.:...
  Fly   720 ERNRHIMLHCQAQGVPTPSIVWKKATGSKS----GEYEEVRERPFTKLLGNGS-LLLQHVKEDRE 779

Mouse   415 GTYTCRA---IVPRIGVAEREVPLYVNGPPIISSEAVQFAV-RGDGGKVECFIGSTPPPDRIAWA 475
            |.|.|:|   |...||   :.:.|.||..|..||.:....| :||...::|.: |...|..|.|.
  Fly   780 GFYLCQANNGIGTGIG---KVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAV-SGDKPINIVWM 840

Mouse   476 WK-ENFLEVGTLERYTVERTNSGSGVLSTLTINNVMEADFQTHYNCTAWNSFGPGTAIIQLEERE 539
            .. :|.|...|..:.:|::..:..||.:.|.|..| :|.....|.|.|.|.:|....::||:.:|
  Fly   841 RSGKNTLNPSTNYKISVKQEATPDGVSAELQIRTV-DATDSGPYFCRASNLYGNDQQLVQLQVQE 904

Mouse   540 -VLPVGIIAGATIGAGILVVFSFAALVFFLYRRRKGSRKDVTLRKLDIKVETVNREPLTMHSDRE 603
             .||..::..|.|.:                            |.::||     .:|.|:.:.  
  Fly   905 PPLPPSVLEAAMISS----------------------------RSVNIK-----WQPKTLGTG-- 934

Mouse   604 DDTASISTATRVMKAIYSSFKDDVDLKQDLRCDTIDTREEYEMKDPTNGYYNVRAHEDRPSSRAV 668
                      .|.|.|....:.|..|...|   .:|..::.|:|||.  ::|......:|::|  
  Fly   935 ----------DVTKYIVEFREADHSLPPAL---FVDQWQQIEVKDPP--HFNAMIENLKPATR-- 982

Mouse   669 LYADYR--APGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASD--YGTEP-TPSGP 718
             || :|  |.|              |:|.:       ||:.:  ..||| .|:||
  Fly   983 -YA-FRVIAEG--------------SAGRS-------APSQELIVRTEPQRPAGP 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KirrelXP_011238330.1 Ig 54..148 CDD:386229 24/97 (25%)
Ig2_KIRREL3-like 170..251 CDD:143236 19/90 (21%)
Ig 255..336 CDD:386229 21/93 (23%)
Ig_3 340..421 CDD:372822 21/82 (26%)
Ig5_KIRREL3 439..536 CDD:143306 27/98 (28%)
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653 24/96 (25%)
IGc2 436..507 CDD:197706 18/82 (22%)
I-set 521..610 CDD:254352 24/110 (22%)
IGc2 533..597 CDD:197706 19/81 (23%)
Ig 630..699 CDD:143165 14/68 (21%)
IG_like 714..802 CDD:214653 23/95 (24%)
Ig 725..802 CDD:299845 22/84 (26%)
Ig 823..894 CDD:143165 20/72 (28%)
FN3 906..1006 CDD:238020 32/174 (18%)
FN3 1013..1111 CDD:238020 2/2 (100%)
FN3 1119..1209 CDD:238020
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.