Sequence 1: | XP_021330579.1 | Gene: | cacna1c / 170581 | ZFINID: | ZDB-GENE-020129-1 | Length: | 2202 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2305 | Identity: | 538/2305 - (23%) |
---|---|---|---|
Similarity: | 897/2305 - (38%) | Gaps: | 678/2305 - (29%) |
- Green bases have known domain annotations that are detailed below.
Zfish 12 KHERLEE------EVEVRFKGKLVSERELGYTHVRPGGSNYSSPSLAPVPSLNEDEHVGGGGGVL 70
Zfish 71 GLAPEHIPT--PGAPLSWQAAIDAARQAKLMGT-----TGAPISTASSTQRKRQHYTKPKKQAST 128
Zfish 129 ASTRPPRALLCLTLKNPIRRACINIVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLE 193
Zfish 194 RVEYLFLIIFTVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGGTSMG 258
Zfish 259 GKAAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELF 323
Zfish 324 MGKMHRTCF--FYKDGHKGHIAEEK--------------------PAPCAPSSAHGRHCSPPNIT 366
Zfish 367 QCMMGW-EGPNDGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPW--VYFVSLVIFG 428
Zfish 429 SFFVLNLVLGVLSGEFSKEREKAKAR--GDFQKLREKQQ--------LEEDLKGYLDWITQ---A 480
Zfish 481 ED--IDPE----------------NDDEGLDDDKPR----------------------------- 498
Zfish 499 ---------NLSMPAS------------------------------------------------- 505
Zfish 506 ----------ENESV-------------------------------------------------- 510
Zfish 511 --NTDNAPAGDME-GETC-----------------CTRMANRI---------------------- 533
Zfish 534 ---------SKSKFSRYSRR------------------------------------WNRLCRRKC 553
Zfish 554 RAAVKSNVFYWLVIF----------LVFLNTLTIASEHHQQPEWLTNVQDIANKVLLALFTGEML 608
Zfish 609 LKMYSLGLQAYFVSLFNRFDSFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSL 673
Zfish 674 SNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETR-------RSTFDNFPQSLL 731
Zfish 732 TVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCI-YFIILFICGNYILLNVFLAIAVDNLADAES 795
Zfish 796 LTSAQKEEEEEKERK---KLARTASPEKR---------------QNSEKPPLE------------ 830
Zfish 831 --------------------DE-------KK--EEKIELKSITSDG-----------ETPTATK- 854
Zfish 855 ---------INIDEYTGEDN-----------------EEKNPYPVNDFPAGEDDEEEPEMPVGPR 893
Zfish 894 PRPL------SDI--QLKEKAVPMPQAKAFFIFSPSN---------KFRVLCHKIVNHNIFTNLI 941
Zfish 942 LFFILLSSISLAAED------PVKNDSFRNQILGYADYVFTGIFTIEIILKMTAYGAFLHKGSFC 1000
Zfish 1001 RNYFNILDLVVVSVSLI---SSGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR 1062
Zfish 1063 TIGNIVIVTSLLQFMFACIGVQLFKGKFFYCTDTSKQTQAECRGAYILYK-DGNVGKPEKAQRSW 1126
Zfish 1127 ENSDFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSHAEDVGPIYNYRVVISIFFIIYIIIIAFF 1191
Zfish 1192 MMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEY----------ALKARPLRRYIPKNPYQYK 1246
Zfish 1247 VWYVVNSTYFEYLMFTLILLNTICLAMQHHGQSQSFNKAMNILNMLFTGLFTVEMILKLIAFKPR 1311
Zfish 1312 GYFSDPWNVFDFLIVIGSIIDVILSEINPADPSSSPPSSVVRPMGLQNTEDNARISITFFRLFRV 1376
Zfish 1377 M---RLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALRDNSQINR 1438
Zfish 1439 NNNFQTFPQAVLLLFRCATGEAWQEIMLACSPNRPCEKGSEINHSSEDCGSHFAIFYFVSFYMLC 1503
Zfish 1504 AFLI-INLFVAVIMDNFDYLTRD-WSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQP 1566
Zfish 1567 PLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLF-ALVRTALRIKTEGN-LEQANE--ELRA 1627
Zfish 1628 ---------IVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVAKI 1683
Zfish 1684 PPKTALSLQAGLRTLHDMGPEIRRAISGDLTVEEELERAMKETVCAASEDDIFRVKRSGGLFGNH 1748
Zfish 1749 VNYYHQSDGHVSFPQSFTTQRPLHISKSGSPGEAESPSHQKLV----DSTFTPSSYSSSGSNANI 1809
Zfish 1810 NNANNTAIGHRYPKPTVSTVD--GQTGPPL 1837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1c | XP_021330579.1 | Ion_trans | 156..452 | CDD:306908 | 89/320 (28%) |
Ion_trans | 559..798 | CDD:306908 | 74/256 (29%) | ||
Ion_trans | 934..1211 | CDD:306908 | 101/286 (35%) | ||
Ion_trans | 1253..1527 | CDD:306908 | 83/278 (30%) | ||
GPHH | 1528..1598 | CDD:318993 | 18/69 (26%) | ||
Ca_chan_IQ | 1600..1671 | CDD:312334 | 15/83 (18%) | ||
CAC1F_C | 1694..2129 | CDD:318975 | 30/150 (20%) | ||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 84/303 (28%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 6/132 (5%) | ||
Ion_trans | 835..1028 | CDD:278921 | 60/205 (29%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 39/241 (16%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 96/269 (36%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 13/55 (24%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 79/259 (31%) | ||
GPHH | 1880..1930 | CDD:293510 | 15/54 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |