DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTL10 and act-4

DIOPT Version :10

Sequence 1:NP_001019846.1 Gene:ACTL10 / 170487 HGNCID:16127 Length:245 Species:Homo sapiens
Sequence 2:NP_508841.1 Gene:act-4 / 180767 WormBaseID:WBGene00000066 Length:376 Species:Caenorhabditis elegans


Alignment Length:243 Identity:81/243 - (33%)
Similarity:140/243 - (57%) Gaps:7/243 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASTALLALCSTGAFSGLAVEAGAGVCHATPIYAGHSWHQATFRLNVAGSTLSRYLRDLLVAANP 65
            :|..|:|:|.::|..:|:.:::|.||.|..|||.|::...|..||::||..|:.||..:|.....
 Worm   135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199

Human    66 DLLQQALPRKAITHLKKRSCYVSLDFEGDLRDPARHH--PASFSVGNGCCVCLSSERFRCPEPIF 128
            .....| .|:.:..:|::.|||:||||.::...|...  ..|:.:.:|..:.:.:|||||||.:|
 Worm   200 SFTTTA-EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263

Human   129 QPGLLGQAEQGLPALAFRALQKMPKTLRTRLADTVVLAGGSTLFPGFAERLDKELEAQCRRHGYA 193
            ||..||....|:...::.::.|....:|..|....||:||:|::||.|:|:.||:.|...    :
 Worm   264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP----S 324

Human   194 ALRPHLVAKHGRGMAVWTGGSMVASLHSFQRRWITRAMYQECGSRLLY 241
            .::..::|...|..:||.|||::|||.:||:.||::..|.|.|..:::
 Worm   325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL10NP_001019846.1 ASKHA_ATPase-like <5..236 CDD:483947 79/232 (34%)
act-4NP_508841.1 ASKHA_NBD_actin 7..371 CDD:466823 81/240 (34%)

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