DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSBP4 and Ssdp

DIOPT Version :10

Sequence 1:XP_006722728.1 Gene:SSBP4 / 170463 HGNCID:15676 Length:457 Species:Homo sapiens
Sequence 2:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster


Alignment Length:463 Identity:198/463 - (42%)
Similarity:238/463 - (51%) Gaps:127/463 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    42 RLALYVYEYLLHIGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRREACEHS 106
            :|||||||||||:||||:||||||||||||||||||||||||:|||||||||||||:||:.|:||
  Fly    19 KLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWWCVFWDLYCAAPERRDQCDHS 83

Human   107 GEAKAFQDY-------------------SAAAAPSPVMGSMAPGDTMA----AGSMAAGFF---- 144
            .|||||.||                   :...|||| :|.|.||....    .|.|...||    
  Fly    84 SEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGGDGGPMGPGGPMGPNFFPNST 147

Human   145 --QGPPGSQPSPHNPNAPMMGPHGQPFM-SPRFPGGPRPTLRMPSQPPA--GLPGSQPLLPGAME 204
              ..||....||..|.:.|| |...||| .||:||||||.:||......  |.|| ||::|.:|:
  Fly   148 MRPSPPTHASSPQPPPSQMM-PGQPPFMGGPRYPGGPRPGVRMQGMGNEFNGPPG-QPMMPNSMD 210

Human   205 PSPRAQGHPSMG-GPMQ-RVTPPRGMASVGPQSYG--GGMRPPPNSLAGP-GLPAMNM-GPGVRG 263
            |:     .|..| |||. |:.||||...:||..||  ||||.|   ..|| |:|.|.| |.|.|.
  Fly   211 PT-----RPGGGMGPMNPRMNPPRGPGGMGPMGYGGPGGMRGP---APGPGGMPPMGMGGAGGRP 267

Human   264 PWASPSGNSIP---YSSSSPGSY----TGPPGGGGPPGTPIMPSPGDSTNS------SENMYTIM 315
            |...|:. |.|   |||||||:|    .||||    |||||||||.|:|..      .::||.:|
  Fly   268 PQWQPNA-SAPLNAYSSSSPGNYGPGSNGPPG----PGTPIMPSPQDNTQGGPVGGPGDSMYALM 327

Human   316 NPIGQGAGRANFPLGPGPE-----------GPM-AAMSAMEP--HHVNGSLGSGDMDGLPKSSPG 366
            .|        .||:|.||:           ||| ...::|.|  :...|..||| :||: |:||.
  Fly   328 KP--------EFPMGGGPDGGGGGGGPGGMGPMGGGPNSMGPVLNGGGGPDGSG-LDGM-KNSPA 382

Human   367 AVAGLSNAPGTPRDDGEMAAAGTFLHPFPSESVSDCVDSPPAAASGRRGWRAGPGGAAGGP-EQD 430
                 :..|||||:|                           :.||...:..   |..||| |.|
  Fly   383 -----NGGPGTPRED---------------------------SGSGMGDYNL---GGFGGPGEND 412

Human   431 RDRGGPVL 438
            :.....:|
  Fly   413 QTESAAIL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSBP4XP_006722728.1 SSDP 104..382 CDD:461334 133/342 (39%)
SsdpNP_001262698.1 SSDP 81..393 CDD:461334 134/369 (36%)

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