DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLIS3 and rsv1

DIOPT Version :10

Sequence 1:NP_001035878.1 Gene:GLIS3 / 169792 HGNCID:28510 Length:930 Species:Homo sapiens
Sequence 2:NP_596183.1 Gene:rsv1 / 2541322 PomBaseID:SPBP4H10.09 Length:428 Species:Schizosaccharomyces pombe


Alignment Length:444 Identity:106/444 - (23%)
Similarity:150/444 - (33%) Gaps:154/444 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   565 KPNKCTFEGCEKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHL------- 622
            |..:|.|  |::.|.|.|:...|:||||||||:.|.:|.|:|.|:...:..:|.||||       
pombe     2 KSYECPF--CKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVTP 64

Human   623 ------------DTKPYACQIPG-------------------------CTKRYTDPSSLRKHVKA 650
                        |:||...:..|                         .:..|..|:|:     :
pombe    65 EQTLDVNLHKAPDSKPEGDKSTGQEADKSQNQSKDGSITDPVQAAVLALSVAYAKPTSV-----S 124

Human   651 HSSKEQQARKKL------RSSTELHPDLLTDCLTVQSLQPATSPRDAAAEGTVGRSPGPGPD--- 706
            .|..:.||:.||      ||::.     .|..|..::..|..  |.:.:|.....:|.|.|.   
pombe   125 LSPTDLQAQSKLIEKPRRRSASN-----ATGSLNKKNQDPLR--RFSISESAGAAAPTPSPSNSK 182

Human   707 -------------------LYSAPIFSSNYSSRSGTAAGAVPP----------PHPVS----HPS 738
                               ..:.|.|:.||.:.|.....:.|.          ..|||    ...
pombe   183 SPPSENRKNRLQNVLSPIASNNVPDFNQNYPTESNPMFLSTPRFQNTNGQRTLTVPVSVWDARQP 247

Human   739 PGHNVQGSP------HNPSSQLPPLTAVDAGAERFAPSA-PSPHHISPRRVPAPSSILQRTQPPY 796
            |..:..|.|      |.||..:||.|..|...|.:.|:| |.|..||....|..|.|  ...|..
pombe   248 PTSSRSGLPLSVMYNHFPSVPIPPATVNDTSMEYYLPNAYPHPTGISLPFYPFDSGI--PVSPNI 310

Human   797 TQQPSGSHLKSYQPETNSSFQPNGIHV----------HGFYGQLQKFCP---------------- 835
            ...||.|.:..| |.|..|.:|..::.          ..|..||   |.                
pombe   311 PVSPSSSFVPMY-PTTFPSSKPQIVNAPPAPSYFSPGSSFGAQL---CANGSTLLRADTKQYGLA 371

Human   836 -PHYPDSQRIVP-----PV-SSCSVVPSFEDCLVPTSMGQAS-----FDVFHRA 877
             |...:|..|.|     || ||...:|:.|.   |:|...|:     ..:||.|
pombe   372 LPKITNSNLISPNQTFNPVKSSVKALPTLEP---PSSPSHATATSSLHTLFHTA 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLIS3NP_001035878.1 SFP1 <558..652 CDD:227516 33/130 (25%)
C2H2 Zn finger 569..591 CDD:275368 8/21 (38%)
C2H2 Zn finger 599..621 CDD:275368 7/21 (33%)
C2H2 Zn finger 629..651 CDD:275368 4/46 (9%)
rsv1NP_596183.1 COG5048 1..427 CDD:227381 106/444 (24%)
C2H2 Zn finger 6..26 CDD:275368 8/21 (38%)
C2H2 Zn finger 34..56 CDD:275368 7/21 (33%)

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