Sequence 1: | XP_006505721.1 | Gene: | Lrrc23 / 16977 | MGIID: | 1315192 | Length: | 370 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608811.2 | Gene: | Cep97 / 33610 | FlyBaseID: | FBgn0031575 | Length: | 806 | Species: | Drosophila melanogaster |
Alignment Length: | 288 | Identity: | 74/288 - (25%) |
---|---|---|---|
Similarity: | 117/288 - (40%) | Gaps: | 61/288 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 95 AHAYIKLEAKDRDLTDISLLRSYIHLRYVDISENHITDISPLNSLTHLLWLKADGNQLRSARMNE 159
Mouse 160 LPYLQIASFSYNQIIDTEGI---FHPRLGSLDLKGNRIHQVTGLDPERLSSLHTLELRGNQLEST 221
Mouse 222 KGI-YLPKLKNLYLAQNLLKKVEGLENLSNLTTLHLR--DNQIETLNGFSQEMKSLQYLNLRSNM 283
Mouse 284 ISDLAELAKLRDLPKLRALVLLDNPCA------DETDYRQEALVQMAHLERLDKEFYEDDDRAEA 342
Mouse 343 EEIRQRLKEEQDQDLDPDQDMEPYLPPV 370 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrc23 | XP_006505721.1 | leucine-rich repeat | 100..119 | CDD:275380 | 5/18 (28%) |
internalin_A | 105..>311 | CDD:380193 | 57/217 (26%) | ||
leucine-rich repeat | 120..141 | CDD:275380 | 1/20 (5%) | ||
leucine-rich repeat | 142..162 | CDD:275380 | 3/19 (16%) | ||
leucine-rich repeat | 163..183 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 184..207 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 208..228 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 229..250 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 251..273 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 274..298 | CDD:275380 | 10/23 (43%) | ||
Cep97 | NP_608811.2 | leucine-rich repeat | 11..31 | CDD:275380 | 1/1 (100%) |
leucine-rich repeat | 32..53 | CDD:275380 | 5/20 (25%) | ||
LRR_RI | <49..189 | CDD:238064 | 49/187 (26%) | ||
LRR_4 | 76..115 | CDD:289563 | 13/40 (33%) | ||
leucine-rich repeat | 76..97 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 97..152 | CDD:290566 | 21/58 (36%) | ||
LRR_4 | 97..137 | CDD:289563 | 13/43 (30%) | ||
leucine-rich repeat | 98..119 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 120..141 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 140..200 | CDD:290566 | 25/82 (30%) | ||
leucine-rich repeat | 142..165 | CDD:275380 | 12/45 (27%) | ||
leucine-rich repeat | 166..190 | CDD:275380 | 10/23 (43%) | ||
IQ | 581..599 | CDD:197470 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |