Sequence 1: | NP_032540.2 | Gene: | Lrp6 / 16974 | MGIID: | 1298218 | Length: | 1613 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
Alignment Length: | 1273 | Identity: | 508/1273 - (39%) |
---|---|---|---|
Similarity: | 755/1273 - (59%) | Gaps: | 55/1273 - (4%) |
- Green bases have known domain annotations that are detailed below.
Mouse 2 GAVLRSLLACSFCVLLRAAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFGHGLIY 66
Mouse 67 WSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 131
Mouse 132 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKL 196
Mouse 197 YWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGLREI 261
Mouse 262 HSNIFSPMDIHAFSQQRQPNATNPCGID----NGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT 322
Mouse 323 CKDGATELLLLARRTDLR----RISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRA 383
Mouse 384 IRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEP 448
Mouse 449 RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDK 513
Mouse 514 IEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQLPDLMG 577
Mouse 578 LKATSVHRIIGSNPCAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV-PEAFLLFSRRAD 641
Mouse 642 IRRISLETNN-NNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 705
Mouse 706 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK 770
Mouse 771 PKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIADDLPH 834
Mouse 835 PFGLTQYQDYIYWTDWSRRSI---ERANKTSGQNRTIIQGHLDYVMDI-LVFHSSRQAGW-NECA 894
Mouse 895 SSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRT-C-SAPTTFLLFSQKSAINRMVIDEQQSPDI 957
Mouse 958 ILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVVANSVANQNLEIQPYDLSID 1022
Mouse 1023 IYSRYIYWTCEATNVIDVTRLDGRSVGVVLKGEQDRPRAIVVNPEKGYMYFTNLQERSP-KIERA 1086
Mouse 1087 ALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLEDSNIL----QP 1147
Mouse 1148 VGLTVFEN---WLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQ 1209
Mouse 1210 DNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPP 1247 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp6 | NP_032540.2 | Beta-propeller 1 | 20..275 | 131/254 (52%) | |
NHL | 55..272 | CDD:302697 | 113/216 (52%) | ||
NHL repeat | 55..93 | CDD:271320 | 16/37 (43%) | ||
LY | 89..127 | CDD:214531 | 20/37 (54%) | ||
NHL repeat | 97..132 | CDD:271320 | 19/34 (56%) | ||
NHL repeat | 140..176 | CDD:271320 | 19/35 (54%) | ||
Ldl_recept_b | 150..190 | CDD:278487 | 22/39 (56%) | ||
LY | 175..216 | CDD:214531 | 22/40 (55%) | ||
NHL repeat | 181..217 | CDD:271320 | 19/35 (54%) | ||
NHL repeat | 226..253 | CDD:271320 | 19/26 (73%) | ||
LDL-receptor class B 5 | 236..277 | 21/40 (53%) | |||
FXa_inhibition | 286..323 | CDD:291342 | 20/40 (50%) | ||
Beta-propeller 2 | 328..589 | 107/265 (40%) | |||
LY | 353..393 | CDD:214531 | 13/39 (33%) | ||
LY | 397..437 | CDD:214531 | 19/39 (49%) | ||
LY | 438..481 | CDD:214531 | 22/42 (52%) | ||
LY | 483..524 | CDD:214531 | 17/40 (43%) | ||
LY | 525..558 | CDD:214531 | 10/32 (31%) | ||
FXa_inhibition | 592..627 | CDD:291342 | 17/34 (50%) | ||
Beta-propeller 3 | 631..890 | 104/264 (39%) | |||
LY | 656..694 | CDD:214531 | 12/37 (32%) | ||
LY | 697..739 | CDD:214531 | 18/41 (44%) | ||
LY | 740..783 | CDD:214531 | 21/42 (50%) | ||
LY | 783..825 | CDD:214531 | 16/42 (38%) | ||
LY | 827..866 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 893..929 | CDD:291342 | 16/36 (44%) | ||
Beta-propeller 4 | 933..1202 | 76/276 (28%) | |||
LY | 958..998 | CDD:214531 | 9/39 (23%) | ||
LY | 1050..1093 | CDD:214531 | 15/43 (35%) | ||
LY | 1094..1136 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 1207..1243 | CDD:291342 | 15/35 (43%) | ||
LDLa | 1249..1285 | CDD:238060 | |||
LDLa | 1288..1322 | CDD:238060 | |||
LDLa | 1326..1360 | CDD:238060 | |||
PPPSP motif A | 1487..1493 | ||||
PPPSP motif B | 1527..1534 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1556..1613 | ||||
PPPSP motif C | 1568..1575 | ||||
PPPSP motif D | 1588..1593 | ||||
PPPSP motif E | 1603..1610 | ||||
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | |
LDLa | 306..340 | CDD:238060 | |||
LDLa | 347..390 | CDD:238060 | |||
LDLa | 397..431 | CDD:238060 | |||
LDLa | 442..476 | CDD:238060 | |||
LDLa | 480..521 | CDD:238060 | |||
FXa_inhibition | 576..604 | CDD:291342 | 4/11 (36%) | ||
LY | 634..671 | CDD:214531 | 17/36 (47%) | ||
NHL | <656..793 | CDD:302697 | 70/137 (51%) | ||
LY | 680..714 | CDD:214531 | 19/33 (58%) | ||
NHL repeat | 681..722 | CDD:271320 | 22/40 (55%) | ||
NHL repeat | 726..760 | CDD:271320 | 18/33 (55%) | ||
LY | 761..803 | CDD:214531 | 22/41 (54%) | ||
NHL repeat | 769..793 | CDD:271320 | 13/23 (57%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 18/31 (58%) | ||
LY | 946..985 | CDD:214531 | 12/38 (32%) | ||
NHL | <967..1142 | CDD:302697 | 81/175 (46%) | ||
LY | 988..1030 | CDD:214531 | 20/41 (49%) | ||
NHL repeat | 998..1037 | CDD:271320 | 21/38 (55%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 21/41 (51%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 18/34 (53%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 17/34 (50%) | ||
NHL | 1260..>1445 | CDD:302697 | 77/184 (42%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 10/35 (29%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/34 (50%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 18/37 (49%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 11/26 (42%) | ||
LY | 1600..1640 | CDD:214531 | 10/39 (26%) | ||
LY | 1643..1686 | CDD:214531 | 15/44 (34%) | ||
LY | 1688..1729 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 13/24 (54%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9901 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D121310at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |