Sequence 1: | NP_032540.2 | Gene: | Lrp6 / 16974 | MGIID: | 1298218 | Length: | 1613 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
Alignment Length: | 1110 | Identity: | 313/1110 - (28%) |
---|---|---|---|
Similarity: | 467/1110 - (42%) | Gaps: | 193/1110 - (17%) |
- Green bases have known domain annotations that are detailed below.
Mouse 592 CAEDNGGCSHLCLYRPQGLRCACPIGFELISDMKTC--IV-----PEAFLLFSRRADIRRISLET 649
Mouse 650 NN--NNVAIPLTGVKEASALDFDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGLDYPEGM 710
Mouse 711 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDR 775
Mouse 776 AAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSDMLGLNREVIADD-LPHPFGL 838
Mouse 839 TQYQDYIYWTDWSRRSIERANKTSG-------QNRTIIQGHLDYVMDILVFHSSRQAGWNECASS 896
Mouse 897 NGHCSHLC-LAVP-VGGFVCGCPAHYSLNADNRTCSAPT----------TFLLFSQKSAINRMVI 949
Mouse 950 DEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHEDGGQGFNVVANSVANQNLEI 1014
Mouse 1015 QPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVV--LKGEQDRPRAIVVNPEKGYMYFTNLQ 1077
Mouse 1078 ERSPKIERAALDGTEREV-LFFSGL-SKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLE 1140
Mouse 1141 DSNILQPVGLTVFEN---W-------LYWIDKQQQMIEK-IDMTGREGRTKVQ--ARIAQLSDIH 1192
Mouse 1193 AVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQ-DELSCGEPPTCSPQQFTC 1256
Mouse 1257 FTGDIDCIPVAWRCDGFTECEDHSDELNCP---------VCSESQFQCASG-QCIDGALRCNGDA 1311
Mouse 1312 NCQDKSDEKNCEVL-----CLIDQFRCANGQCVGKHKKCDHSVDCSDRSDELDCYPTEEPAPQAT 1371
Mouse 1372 NTVGSVIGVIVTIFVSGTIYFICQRMLCPRMKGDGETMTNDYVVHSPASVPLGYVPHPSSLSGSL 1436
Mouse 1437 -PGMSR---GKSMISSLSIMG-GSSGPPYDRAHV-TGASSSSSSSTKGTYFPAILNPPPSPATER 1495
Mouse 1496 SHYTMEFGYSSN----SPSTHRSYSYRPYSYRHFAPPTTPCST--------DVCDSDYAPSRRMT 1548
Mouse 1549 SVATAKGYTSDVNYDSEPVPPPPTPRSQYLSAE-----ENYESCPPSPYTERSYSHHLYPPPPSP 1608
Mouse 1609 CTDSS 1613 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp6 | NP_032540.2 | Beta-propeller 1 | 20..275 | ||
NHL | 55..272 | CDD:302697 | |||
NHL repeat | 55..93 | CDD:271320 | |||
LY | 89..127 | CDD:214531 | |||
NHL repeat | 97..132 | CDD:271320 | |||
NHL repeat | 140..176 | CDD:271320 | |||
Ldl_recept_b | 150..190 | CDD:278487 | |||
LY | 175..216 | CDD:214531 | |||
NHL repeat | 181..217 | CDD:271320 | |||
NHL repeat | 226..253 | CDD:271320 | |||
LDL-receptor class B 5 | 236..277 | ||||
FXa_inhibition | 286..323 | CDD:291342 | |||
Beta-propeller 2 | 328..589 | ||||
LY | 353..393 | CDD:214531 | |||
LY | 397..437 | CDD:214531 | |||
LY | 438..481 | CDD:214531 | |||
LY | 483..524 | CDD:214531 | |||
LY | 525..558 | CDD:214531 | |||
FXa_inhibition | 592..627 | CDD:291342 | 12/34 (35%) | ||
Beta-propeller 3 | 631..890 | 91/271 (34%) | |||
LY | 656..694 | CDD:214531 | 8/39 (21%) | ||
LY | 697..739 | CDD:214531 | 18/41 (44%) | ||
LY | 740..783 | CDD:214531 | 24/42 (57%) | ||
LY | 783..825 | CDD:214531 | 10/42 (24%) | ||
LY | 827..866 | CDD:214531 | 15/46 (33%) | ||
FXa_inhibition | 893..929 | CDD:291342 | 17/37 (46%) | ||
Beta-propeller 4 | 933..1202 | 64/295 (22%) | |||
LY | 958..998 | CDD:214531 | 7/39 (18%) | ||
LY | 1050..1093 | CDD:214531 | 12/44 (27%) | ||
LY | 1094..1136 | CDD:214531 | 15/43 (35%) | ||
FXa_inhibition | 1207..1243 | CDD:291342 | 15/36 (42%) | ||
LDLa | 1249..1285 | CDD:238060 | 13/35 (37%) | ||
LDLa | 1288..1322 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1326..1360 | CDD:238060 | 16/33 (48%) | ||
PPPSP motif A | 1487..1493 | 0/5 (0%) | |||
PPPSP motif B | 1527..1534 | 3/6 (50%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1556..1613 | 14/61 (23%) | |||
PPPSP motif C | 1568..1575 | 0/6 (0%) | |||
PPPSP motif D | 1588..1593 | 1/4 (25%) | |||
PPPSP motif E | 1603..1610 | 0/6 (0%) | |||
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | |||
LDLa | 184..216 | CDD:238060 | |||
LDLa | 227..262 | CDD:238060 | |||
LDLa | 271..302 | CDD:238060 | |||
FXa_inhibition | 352..387 | CDD:291342 | 12/34 (35%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 16/39 (41%) | ||
LY | 466..508 | CDD:214531 | 18/41 (44%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 19/39 (49%) | ||
LY | 553..595 | CDD:214531 | 10/41 (24%) | ||
LY | 596..637 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 16/30 (53%) | ||
LY | 774..815 | CDD:214531 | 13/46 (28%) | ||
LDLa | 1032..1062 | CDD:238060 | 12/31 (39%) | ||
LDLa | 1074..1109 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1118..1152 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1157..1189 | CDD:197566 | 9/61 (15%) | ||
LDLa | 1198..1232 | CDD:238060 | 9/33 (27%) | ||
LDLa | 1243..1279 | CDD:238060 | 10/69 (14%) | ||
LDLa | 1283..1318 | CDD:238060 | 8/42 (19%) | ||
LDLa | 1340..1371 | CDD:197566 | 5/17 (29%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | |||
EGF_CA | 1418..1452 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |