Sequence 1: | NP_032539.2 | Gene: | Lrp5 / 16973 | MGIID: | 1278315 | Length: | 1614 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
Alignment Length: | 1662 | Identity: | 709/1662 - (42%) |
---|---|---|---|
Similarity: | 993/1662 - (59%) | Gaps: | 139/1662 - (8%) |
- Green bases have known domain annotations that are detailed below.
Mouse 27 PAAA---SP-LLLFANRRDVRLVD----AGGVKLESTIVASGLEDAAAVDFQFSKGAVYWTDVSE 83
Mouse 84 EAIKQTYLNQTG------AAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRK 142
Mouse 143 VLFWQDLDQPRAIALDPAHGYMYWTDWGEAPRIERAGMDGS--TRKIIVDSDIYWPNGLTIDLEE 205
Mouse 206 QKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQR 270
Mouse 271 KEILSALYSPMDIQVLSQERQPPFHTPCEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTC 335
Mouse 336 KTGAEEVLLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAY 400
Mouse 401 LDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVL 465
Mouse 466 HPVMGLMYWTDWGE-NPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVI 529
Mouse 530 NIDGTKRKTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKA-SRDVIIDQLPDLMGLKAV 593
Mouse 594 NVAKVVGTNPCADGNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIIPEAFLVFTSRATIHRIS 658
Mouse 659 L---ETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPE 720
Mouse 721 GMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRI 785
Mouse 786 VRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYW-TDLDTNMIESSNMLGQERMV-IADDLPYPF 848
Mouse 849 GLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCVHSNGQCG 913
Mouse 914 QLCLAIPG--GHRCGCASHYTLDPSSRNCSPPSTFLLFSQKFAISRMIPDDQLSPDLVLPLHGLR 976
Mouse 977 NVKAINYDPLDKFIYWVDGR-QNIKRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIYSRTLFWT 1040
Mouse 1041 CEATNTINVHRLDGDAMGVVLRGDRDKPRAIAVNAERGYMYFTNMQDHAAKIERASLDGTEREVL 1105
Mouse 1106 FTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTVLGRHLYWID 1170
Mouse 1171 RQQQMIERVEKTTGDKRTRVQGRVTHLTGIHAVEEVSLEEFSAHPCARDNGGCSHICIAKGDGTP 1235
Mouse 1236 R----CSCPVHLVLLQNLLTCGEPPTCSPDQFACTT-----GEI--DCIPGAWRCDGFPECADQS 1289
Mouse 1290 DEEGCPVCSASQFPCARGQCVDLRLRCDGEADCQDRSDEANCDAVC-LPNQFRCTSGQ-CVLIKQ 1352
Mouse 1353 QCDSFPDCADGSDE---LMCEINKPPSDDIPAHSSAIGPVIGIILSLFVMGGVYFVCQRVMCQRY 1414
Mouse 1415 TGASGPFPHEYVGGAPHVPLNFIAPGGSQHGPFPGIPCSKSVMSS----------MSLVGGRGSV 1469
Mouse 1470 PLYDRNHVTGASSSSSSSTKATLYPPILNPPPSPATDPSLYNVDVFYSSGIPATARPYRPYVIRG 1534
Mouse 1535 MAPPTTPCSTDVC---DSDYST------SRWKSSKY-------YLDLNSDSDPYPPPPTPHSQYL 1583
Mouse 1584 S-----AEDSCPPSPGTERS-YCHLFPPPPSPCTDSS 1614 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp5 | NP_032539.2 | Beta-propeller 1 | 31..287 | 115/268 (43%) | |
NHL | <36..>168 | CDD:302697 | 58/141 (41%) | ||
NHL repeat | 64..103 | CDD:271320 | 14/44 (32%) | ||
LY | 101..141 | CDD:214531 | 22/39 (56%) | ||
NHL repeat | 106..147 | CDD:271320 | 25/40 (63%) | ||
Ldl_recept_b | 162..202 | CDD:278487 | 21/41 (51%) | ||
LY | 186..228 | CDD:214531 | 18/41 (44%) | ||
LY | 229..270 | CDD:214531 | 18/40 (45%) | ||
LDL-receptor class B 5 | 247..289 | 15/41 (37%) | |||
FXa_inhibition | 298..335 | CDD:291342 | 19/36 (53%) | ||
Beta-propeller 2 | 340..601 | 141/262 (54%) | |||
LY | 365..405 | CDD:214531 | 20/39 (51%) | ||
LY | 407..449 | CDD:214531 | 27/41 (66%) | ||
LY | 450..493 | CDD:214531 | 23/43 (53%) | ||
LY | 494..536 | CDD:214531 | 25/41 (61%) | ||
LY | 537..570 | CDD:214531 | 17/32 (53%) | ||
FXa_inhibition | 604..639 | CDD:291342 | 18/34 (53%) | ||
Beta-propeller 3 | 643..902 | 117/263 (44%) | |||
NHL | 684..877 | CDD:302697 | 89/194 (46%) | ||
LY | 709..751 | CDD:214531 | 21/41 (51%) | ||
NHL repeat | 719..755 | CDD:271320 | 21/35 (60%) | ||
NHL repeat | 762..801 | CDD:271320 | 20/38 (53%) | ||
NHL repeat | 807..842 | CDD:271320 | 13/36 (36%) | ||
NHL repeat | 846..870 | CDD:271320 | 11/23 (48%) | ||
FXa_inhibition | 905..940 | CDD:291342 | 16/36 (44%) | ||
Beta-propeller 4 | 944..1211 | 95/267 (36%) | |||
LY | 969..1008 | CDD:214531 | 17/39 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1002..1025 | 4/22 (18%) | |||
LY | 1059..1102 | CDD:214531 | 18/42 (43%) | ||
LY | 1103..1145 | CDD:214531 | 11/41 (27%) | ||
FXa_inhibition | 1216..1252 | CDD:291342 | 19/39 (49%) | ||
LDLa | 1258..1294 | CDD:238060 | 19/42 (45%) | ||
LDLa | 1297..1331 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1335..1369 | CDD:238060 | 13/38 (34%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1474..1498 | 11/23 (48%) | |||
PPPSP motif A | 1499..1505 | 5/5 (100%) | |||
PPPSP motif B | 1537..1544 | 5/6 (83%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1567..1599 | 21/37 (57%) | |||
PPPSP motif C | 1573..1580 | 6/6 (100%) | |||
PPPSP motif D | 1590..1595 | 4/4 (100%) | |||
PPPSP motif E | 1604..1611 | 6/6 (100%) | |||
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 22/38 (58%) |
NHL | 168..503 | CDD:302697 | 169/337 (50%) | ||
NHL repeat | 172..237 | CDD:271320 | 41/64 (64%) | ||
LY | 252..293 | CDD:214531 | 18/40 (45%) | ||
NHL repeat | 261..298 | CDD:271320 | 18/37 (49%) | ||
NHL repeat | 303..339 | CDD:271320 | 18/36 (50%) | ||
NHL repeat | 341..419 | CDD:271320 | 31/78 (40%) | ||
NHL repeat | 428..476 | CDD:271320 | 22/47 (47%) | ||
LY | 472..511 | CDD:214531 | 27/38 (71%) | ||
NHL repeat | 477..503 | CDD:271320 | 19/25 (76%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 23/38 (61%) | ||
LY | 558..599 | CDD:214531 | 25/40 (63%) | ||
LY | 600..641 | CDD:214531 | 20/40 (50%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 18/34 (53%) | ||
LY | 739..773 | CDD:214531 | 17/33 (52%) | ||
LY | 776..818 | CDD:214531 | 21/41 (51%) | ||
LY | 819..860 | CDD:214531 | 21/41 (51%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 16/36 (44%) | ||
LY | 1122..1164 | CDD:214531 | 18/42 (43%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 19/39 (49%) | ||
LDLa | 1319..1362 | CDD:238060 | 19/42 (45%) | ||
LDLa | 1365..1399 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1399..1433 | CDD:197566 | 12/36 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I5564 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1327 | 1.000 | Inparanoid score | I146 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48457 | |
OrthoDB | 1 | 1.010 | - | - | D121310at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004181 | |
OrthoInspector | 1 | 1.000 | - | - | otm44191 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46513 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4876 |
SonicParanoid | 1 | 1.000 | - | - | X3498 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.870 |