Sequence 1: | NP_032539.2 | Gene: | Lrp5 / 16973 | MGIID: | 1278315 | Length: | 1614 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
Alignment Length: | 1205 | Identity: | 282/1205 - (23%) |
---|---|---|---|
Similarity: | 449/1205 - (37%) | Gaps: | 363/1205 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 298 CEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKT---GAEE---VLLLARRTDLRRISL 356
Mouse 357 DTPDFTDIVLQV-GDIRHAIAIDYDPLEGYVYWTD--DEVRAIRRAYLDGSGAQTLVNTEINDPD 418
Mouse 419 GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKI 483
Mouse 484 ECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDKLPHIF 548
Mouse 549 GFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCADGNGGCSH 613
Mouse 614 LCFFT-PR--ATKCGCPIGLELLSDMKTCIIPE----AFLVFTSRATIHRISLETNNNDVAIPLT 671
Mouse 672 GVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSV------EHVIEF-------------GLD 717
Mouse 718 YPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVL-VWRDLDNPRSLALDPTKGYIYWT---- 777
Mouse 778 --------EWGGKPRIVRAFMD--GTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNM 832
Mouse 833 LGQERMVIADDLPYPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMD------- 890
Mouse 891 ------------ILVFHSSRQDGLNDCVHSNGQCGQLCLAIPGGHR-CGCASHYTL-DPSSRNCS 941
Mouse 942 PPSTFLLFSQKFAISRMIPDDQLSPDLVLPL----HGLRNVKAINYDPLDKFIYWVDGRQNIKRA 1002
Mouse 1003 KDDGTQPSMLTSPSQSLSPDRQPHDLSIDIYSRTLFWTCEATNTINVHRLDGDAMGVVLRGDRDK 1067
Mouse 1068 PRAIAVNAERGYMYFTNMQDHAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADL 1132
Mouse 1133 KRIESCDLSGANRLTLEDANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVTHL 1197
Mouse 1198 TGIHAVEEVSLEEFSAHPCARDNGGC---SHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCS 1259
Mouse 1260 PDQFACTTGEIDCIPGAWRCDGFPECADQSDEEGCPV---CSASQFPCARGQCVDLRLRCDGEAD 1321
Mouse 1322 CQDRSDEANCDA---------------------VCLPN--------------------------Q 1339
Mouse 1340 FRCTSG-QCVLIKQQCDSFPDCADGSDELMCEINK 1373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp5 | NP_032539.2 | Beta-propeller 1 | 31..287 | ||
NHL | <36..>168 | CDD:302697 | |||
NHL repeat | 64..103 | CDD:271320 | |||
LY | 101..141 | CDD:214531 | |||
NHL repeat | 106..147 | CDD:271320 | |||
Ldl_recept_b | 162..202 | CDD:278487 | |||
LY | 186..228 | CDD:214531 | |||
LY | 229..270 | CDD:214531 | |||
LDL-receptor class B 5 | 247..289 | ||||
FXa_inhibition | 298..335 | CDD:291342 | 10/36 (28%) | ||
Beta-propeller 2 | 340..601 | 86/266 (32%) | |||
LY | 365..405 | CDD:214531 | 15/42 (36%) | ||
LY | 407..449 | CDD:214531 | 12/41 (29%) | ||
LY | 450..493 | CDD:214531 | 20/42 (48%) | ||
LY | 494..536 | CDD:214531 | 16/41 (39%) | ||
LY | 537..570 | CDD:214531 | 11/32 (34%) | ||
FXa_inhibition | 604..639 | CDD:291342 | 13/37 (35%) | ||
Beta-propeller 3 | 643..902 | 61/315 (19%) | |||
NHL | 684..877 | CDD:302697 | 51/226 (23%) | ||
LY | 709..751 | CDD:214531 | 16/54 (30%) | ||
NHL repeat | 719..755 | CDD:271320 | 14/36 (39%) | ||
NHL repeat | 762..801 | CDD:271320 | 14/52 (27%) | ||
NHL repeat | 807..842 | CDD:271320 | 9/34 (26%) | ||
NHL repeat | 846..870 | CDD:271320 | 4/23 (17%) | ||
FXa_inhibition | 905..940 | CDD:291342 | 10/36 (28%) | ||
Beta-propeller 4 | 944..1211 | 25/270 (9%) | |||
LY | 969..1008 | CDD:214531 | 5/42 (12%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1002..1025 | 5/22 (23%) | |||
LY | 1059..1102 | CDD:214531 | 4/42 (10%) | ||
LY | 1103..1145 | CDD:214531 | 2/41 (5%) | ||
FXa_inhibition | 1216..1252 | CDD:291342 | 12/38 (32%) | ||
LDLa | 1258..1294 | CDD:238060 | 17/35 (49%) | ||
LDLa | 1297..1331 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1335..1369 | CDD:238060 | 18/60 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1474..1498 | ||||
PPPSP motif A | 1499..1505 | ||||
PPPSP motif B | 1537..1544 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1567..1599 | ||||
PPPSP motif C | 1573..1580 | ||||
PPPSP motif D | 1590..1595 | ||||
PPPSP motif E | 1604..1611 | ||||
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | |||
LDLa | 184..216 | CDD:238060 | |||
LDLa | 227..262 | CDD:238060 | |||
LDLa | 271..302 | CDD:238060 | |||
FXa_inhibition | 352..387 | CDD:291342 | 10/36 (28%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 13/39 (33%) | ||
LY | 466..508 | CDD:214531 | 12/41 (29%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 20/39 (51%) | ||
LY | 553..595 | CDD:214531 | 16/41 (39%) | ||
LY | 596..637 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 12/30 (40%) | ||
LY | 774..815 | CDD:214531 | 14/40 (35%) | ||
LDLa | 1032..1062 | CDD:238060 | 5/43 (12%) | ||
LDLa | 1074..1109 | CDD:238060 | 14/162 (9%) | ||
LDLa | 1118..1152 | CDD:238060 | 14/66 (21%) | ||
LDLa | 1157..1189 | CDD:197566 | 15/33 (45%) | ||
LDLa | 1198..1232 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1243..1279 | CDD:238060 | 3/35 (9%) | ||
LDLa | 1283..1318 | CDD:238060 | 15/34 (44%) | ||
LDLa | 1340..1371 | CDD:197566 | |||
FXa_inhibition | 1388..1416 | CDD:291342 | |||
EGF_CA | 1418..1452 | CDD:214542 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |