Sequence 1: | XP_036011543.1 | Gene: | Lrp1 / 16971 | MGIID: | 96828 | Length: | 4562 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
Alignment Length: | 2006 | Identity: | 640/2006 - (31%) |
---|---|---|---|
Similarity: | 957/2006 - (47%) | Gaps: | 331/2006 - (16%) |
- Green bases have known domain annotations that are detailed below.
Mouse 641 KTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPK---DSRRGRLERAWMDGSHRDIFVTSKTVLWP 702
Mouse 703 NGLSLDIP--AGRLYWVDAF--YDRIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRS 763
Mouse 764 GSVYRLERGVAGAPPTVTLL----RSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Mouse 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQ------------------CQPGE--FACANNRCIQ 869
Mouse 870 ERWKCDGDNDCLDNSDEAPAL---CHQ---HT-CPSDRFKCENNRCIPNRWLCDGDNDCGNSEDE 927
Mouse 928 SNATCSART-CPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCI 991
Mouse 992 NINWRCDNEKDCGDGSDEKTCPEPADNDCGDNSDEAGCSHSCSSTQFKCN---------SGRCIP 1047
Mouse 1048 EHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 1112
Mouse 1113 KSCE--GVTH--VCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCEALAC-----RPPSH 1168
Mouse 1169 PCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD---QCSLNNGGCSHNCSVAPGEGIVCSCPLGM 1230
Mouse 1231 ELGSDNHTCQIQSYCAKHLK---CSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFS 1292
Mouse 1293 NRHEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKIYRGKLL-DNGALTSFEVV 1356
Mouse 1357 IQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTLLAGDIEHPRAIALDPRDGILFW 1421
Mouse 1422 TDWDASLPRIEAASMSGAGRRTIHRETGSGG--WPNGLTVDYLEKRILWIDARSDAIYSARYDGS 1484
Mouse 1485 GHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPS 1549
Mouse 1550 RQPMAPNPCEAN--GGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTCYE-FKKFLLYARQMEI 1611
Mouse 1612 R------------GVDLDAPYYNYIISFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFING 1664
Mouse 1665 TGVETVVSADLPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVV-QGLEQPHGLVVH 1728
Mouse 1729 PLRGKLYWTD-GDN--ISMANMDGSNHTLLFSGQK-GPVGLAIDFPESKLYWISSGNHTINRCNL 1789
Mouse 1790 DGSELEVIDTMRSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSG-SVVLRNSTTLVMHMKV 1853
Mouse 1854 YDESIQLEHEGTNPCSVNNGDCSQLCL--PTSETTRSCMCTAGYSLRSGQQAC-EGVGSFLLYSV 1915
Mouse 1916 HEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTN 1980
Mouse 1981 GIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEW 2045
Mouse 2046 GHYPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREVVLS 2110
Mouse 2111 SNNMDMFSVSVFEDFIYWSD--------RTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVFN 2167
Mouse 2168 RDRQKGT--NVCAVANGGCQQLCLYRGGGQRACACAHGMLAEDGAS--CREY-AGYLLYSERTIL 2227
Mouse 2228 KSIHLS--DERNLNAPVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQIN--D 2288
Mouse 2289 DGSGRTTIVENVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQTR-PGAFERETVITMSGDDHP 2352
Mouse 2353 RAFVLDECQNLMFWTNWNELHPS-IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATL 2416
Mouse 2417 DKIERCEYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKYVGSD----------- 2470
Mouse 2471 ---MKLLRVDIPQQPMGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSC 2523 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp1 | XP_036011543.1 | LDLa | 27..60 | CDD:197566 | |
LDLa | 72..105 | CDD:197566 | |||
FXa_inhibition | 120..149 | CDD:405372 | |||
FXa_inhibition | 159..189 | CDD:405372 | |||
LY | 276..315 | CDD:214531 | |||
LY | 317..359 | CDD:214531 | |||
LY | 362..402 | CDD:214531 | |||
FXa_inhibition | 487..520 | CDD:405372 | |||
LY | 552..594 | CDD:214531 | |||
LY | 595..634 | CDD:214531 | |||
LY | 641..690 | CDD:214531 | 14/51 (27%) | ||
LY | <701..734 | CDD:214531 | 6/36 (17%) | ||
FXa_inhibition | 808..843 | CDD:405372 | 4/34 (12%) | ||
LDLa | 854..886 | CDD:197566 | 8/51 (16%) | ||
LDLa | 896..929 | CDD:238060 | 16/32 (50%) | ||
LDLa | 936..968 | CDD:197566 | 16/32 (50%) | ||
LDLa | 979..1012 | CDD:238060 | 17/32 (53%) | ||
LDLa | 1033..1066 | CDD:238060 | 20/41 (49%) | ||
LDLa | 1080..1115 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1122..1158 | CDD:238060 | 15/35 (43%) | ||
LDLa | 1163..1196 | CDD:238060 | 9/37 (24%) | ||
FXa_inhibition | 1203..1239 | CDD:405372 | 8/35 (23%) | ||
LY | 1354..1394 | CDD:214531 | 15/39 (38%) | ||
LY | 1398..1441 | CDD:214531 | 16/42 (38%) | ||
LY | 1442..1486 | CDD:214531 | 18/45 (40%) | ||
LY | 1631..1667 | CDD:214531 | 10/35 (29%) | ||
LY | 1668..1711 | CDD:214531 | 17/42 (40%) | ||
LY | 1715..1752 | CDD:214531 | 16/40 (40%) | ||
LY | 1752..1793 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 1868..1904 | CDD:405372 | 17/37 (46%) | ||
LY | 1934..1974 | CDD:214531 | 11/39 (28%) | ||
LY | 1977..2017 | CDD:214531 | 17/39 (44%) | ||
LY | 2018..2061 | CDD:214531 | 21/42 (50%) | ||
LY | 2063..2105 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 2177..2212 | CDD:405372 | 11/36 (31%) | ||
YvrE | 2271..2481 | CDD:225921 | 63/227 (28%) | ||
Ldl_recept_b | 2362..2403 | CDD:395012 | 14/41 (34%) | ||
LY | 2388..2429 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 2500..2532 | CDD:405372 | 11/24 (46%) | ||
LDLa | 2545..2575 | CDD:238060 | |||
LDLa | 2584..2618 | CDD:238060 | |||
LDLa | 2623..2657 | CDD:238060 | |||
LDLa | <2684..2706 | CDD:238060 | |||
LDLa | 2714..2748 | CDD:238060 | |||
LDLa | 2752..2783 | CDD:197566 | |||
LDLa | 2791..2824 | CDD:197566 | |||
LDLa | 2835..2867 | CDD:197566 | |||
LDLa | 2875..2908 | CDD:197566 | |||
LDLa | 2925..2957 | CDD:238060 | |||
cEGF | 2980..3003 | CDD:403760 | |||
EGF_CA | 3000..>3029 | CDD:214542 | |||
LY | 3067..3111 | CDD:214531 | |||
LY | 3112..3154 | CDD:214531 | |||
LY | 3156..3198 | CDD:214531 | |||
LY | 3200..3241 | CDD:214531 | |||
LY | 3242..3282 | CDD:214531 | |||
FXa_inhibition | 3312..3348 | CDD:405372 | |||
LDLa | 3352..3383 | CDD:238060 | |||
LDLa | 3392..3426 | CDD:238060 | |||
LDLa | 3431..3466 | CDD:238060 | |||
LDLa | 3470..3503 | CDD:197566 | |||
LDLa | 3511..3544 | CDD:197566 | |||
LDLa | 3554..3588 | CDD:238060 | |||
LDLa | 3593..3627 | CDD:238060 | |||
LDLa | 3631..3665 | CDD:238060 | |||
LDLa | 3671..3703 | CDD:197566 | |||
LDLa | 3713..3749 | CDD:238060 | |||
LDLa | 3764..3794 | CDD:238060 | |||
LY | 3973..4010 | CDD:214531 | |||
Ldl_recept_b | 4031..4071 | CDD:395012 | |||
LY | 4055..4096 | CDD:214531 | |||
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 17/34 (50%) |
LDLa | 306..340 | CDD:238060 | 18/34 (53%) | ||
LDLa | 347..390 | CDD:238060 | 20/44 (45%) | ||
LDLa | 397..431 | CDD:238060 | 17/34 (50%) | ||
LDLa | 442..476 | CDD:238060 | 15/35 (43%) | ||
LDLa | 480..521 | CDD:238060 | 11/41 (27%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 14/27 (52%) | ||
LY | 634..671 | CDD:214531 | 18/41 (44%) | ||
NHL | <656..793 | CDD:302697 | 57/146 (39%) | ||
LY | 680..714 | CDD:214531 | 13/33 (39%) | ||
NHL repeat | 681..722 | CDD:271320 | 16/40 (40%) | ||
NHL repeat | 726..760 | CDD:271320 | 15/34 (44%) | ||
LY | 761..803 | CDD:214531 | 18/45 (40%) | ||
NHL repeat | 769..793 | CDD:271320 | 10/23 (43%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 13/30 (43%) | ||
LY | 946..985 | CDD:214531 | 11/47 (23%) | ||
NHL | <967..1142 | CDD:302697 | 63/179 (35%) | ||
LY | 988..1030 | CDD:214531 | 17/43 (40%) | ||
NHL repeat | 998..1037 | CDD:271320 | 14/40 (35%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 16/41 (39%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 15/34 (44%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 17/37 (46%) | ||
NHL | 1260..>1445 | CDD:302697 | 72/186 (39%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 8/35 (23%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/34 (50%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 21/37 (57%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 7/26 (27%) | ||
LY | 1600..1640 | CDD:214531 | 10/44 (23%) | ||
LY | 1643..1686 | CDD:214531 | 13/46 (28%) | ||
LY | 1688..1729 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 11/24 (46%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 56 | 1.000 | Domainoid score | I10974 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 1 | 1.100 | - | - | O | PTHR24270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.810 |