Sequence 1: | XP_016867287.1 | Gene: | PKD1L1 / 168507 | HGNCID: | 18053 | Length: | 2920 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335980.1 | Gene: | pkd1b / 565697 | ZFINID: | ZDB-GENE-100707-2 | Length: | 4007 | Species: | Danio rerio |
Alignment Length: | 2848 | Identity: | 583/2848 - (20%) |
---|---|---|---|
Similarity: | 964/2848 - (33%) | Gaps: | 825/2848 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 324 SGSEILYP---PTQHPPV---AILARNSDNFMNPVLNCSLEVEARAP--PNLGFRVH-------- 372
Human 373 ---------MASGEALCLMMDFGDSSGVEMRLHNMSEAMAVTAYHQYSKGIFF------HLLHFQ 422
Human 423 LDMSTYKEAE---TQNTTLNVYLCQSENSCLEDSDPSNLGYELISAFVTKGVYMLKAVIYNEFHG 484
Human 485 TEVELGPYYVEIGHEAVSAFMNSSSVHEDEVLVFADSQVNQKSTVVIHHFPSIPSYNVSFISQTQ 549
Human 550 VGDSQAWHSM---------TVWYKMQSVSVYTNGTVFATDTDITF----TAVTKETIPLEFE--- 598
Human 599 -------WYF---GEDPPVRTTSRSIKKRLSIPQW----YRVMVKASNRM--SSVVSEPHVIRVQ 647
Human 648 KKIVANRLTSPSSALVNASVAFECWINFGTDVAYLWDFGD---GTVSLGSSSSSHVYSREGEFTV 709
Human 710 EVLAFNNVSASTLRQQLFIVCEPCQPPLVKNMGPGKVQIWRSQPVRLGVTFEAAVFCD--ISQGL 772
Human 773 SYTWNLMDSEGLP----VSLPAAVDTHRQTLILPSHTLEYGNYTALAKVQIEGSVVYSNYCVGLE 833
Human 834 VRAQAPVSVISEGTHLFFSRTTSSPIVLRGTQSFDPDDPGATLRYHWECATAGSPAHPCFDSSTA 898
Human 899 HQLDAAAPTVSFEAQWLSDSYDQFLVMLRVSS-GGRNSSETRVFLSP----YPDSAFRF------ 952
Human 953 ---------------------VHISWVSFKDTF--VNWNDELSLQAMCEDCSEIPNLSYSWDLFL 994
Human 995 VNATEKNRIEVPFCRVVGLLGSLGLGAISESSQLNLLPTEPGTADPDATTTPFSREPSPVTLGQP 1059
Human 1060 ATSAPRGTPTEPMTGVYWIPPAGDSAVLGEAPEEGSLDLEPGPQSKGSLMTGRSERSQPTHSPDP 1124
Human 1125 HLSDFEAYYSDIQEAIPSGGRQPAKDTSFPGSGPSLSAEESPGDGDNLVDPSLSAGRAEPVLMID 1189
Human 1190 WPKALLGRAVFQGYSSSGITEQTVTIKPYSLSSGETYVLQVSVAS-KHGLLGKAQLYLTVNPAPR 1253
Human 1254 DMACQVQPHHGLE-AHTVFSVFCMSGKPDFHYE-----FSYQIGNTSKH-------TLYHGRDTQ 1305
Human 1306 YYFVLPAG--EHLDNYKVM-VSTEITDGKGSKVQPCTVVVTVLPRYHGNDCLGEDLYNSSLKNLS 1367
Human 1368 TLQLMGSYTEIRNYITVITRILSRLSK------EDK---------TASCNQWSRIQD-ALISSVC 1416
Human 1417 RLAFVDQEEMIGSVLMLRDLVSFSNKLGFMSAVL-----ILKYTRALLAQGQFSGPFVIDKGVRL 1476
Human 1477 ELIGLISRVWEVSEQENSKEEVYRHEEGITVISDL--LLGCLSLNHVSTGQMEFRTLLHYNLQSS 1539
Human 1540 VQSLG----------------SVQVHLPGDLAGHSPAGAETQSPCYISQLILFKKNPY-PGSQAP 1587
Human 1588 GQIGGVVGLNLYTCSSRRPINRQWLRKPVMVEFGEEDGLDNRRNKTTFVLLRDKVNLH-----QF 1647
Human 1648 T--ELSENPQESLQIEIEFSKPVTRAFPVMLLVRFSEKPTPSDFLVKQIYFWDESIVQIYIPAAS 1710
Human 1711 QKDASVGYLS-LLDADYDRKPPNRYLAK-----------AVNYTVH---FQWIRCLFWDKRE--W 1758
Human 1759 KSERFSPQPGTSPEKVNCSYHRLAAFALLRRKLKASFEVSDISKLQSHPENLL---PSI------ 1814
Human 1815 ---FIMGSVILYGFLVA-KSRQVDHHEKKKAGYIFLQEASLPGHQLYAVVIDTGFRAPARLTSKV 1875
Human 1876 YIVLCGDNGLSETKELSCPEKPLFERNSRHTFILSAPAQLGLLRKIRLWHDSRGPSPGWFISHVM 1940
Human 1941 VKELHTGQGWFFPAQCWLSA--GRHDGRVEREL--TCLQGGLGFRKLFYCKFTEYLEDFHVWLSV 2001
Human 2002 YSRPSSSRYLHTPRLTVSFSLLCVYACLTAL-VAAGGQEQPHLDVSPTL----GSFRVGLLCTLL 2061
Human 2062 ASPGAQLLSLLFRLSKE----------APGSARVE-----PHSPLRGGAQTEAPHGPNS------ 2105
Human 2106 ----------------WGRIPDAQEPR--KQPASAILSG----SGRA---QRKAA---------- 2135
Human 2136 --SDNG----TACPAPKLQVHGADHSRTSLMGK------SHCCPPHTQAPSSGLEGLMPQWS--- 2185
Human 2186 ---RALQPWW--SSAVWAICGTAS----------------------------------------- 2204
Human 2205 LACSLGT-----GFLAYRFGQEQCVQWLHLLSLSVVCCIFITQPLMVCLMALGFAWKRRADNHFF 2264
Human 2265 TESLCEATRDLDSELAERSWTRLPFSSSCSIPDCAGEVEKVLAARQQARHLR-WAHPPSKAQLRG 2328
Human 2329 TRQRMRRESRTRAALRDISMDILMLLLLLCVIYGRFSQ--DEYSLNQAIRKEFTRNARNCLGGLR 2391
Human 2392 NIADWWD---WSLTTLLDGLYPGGTPSARVPGAQPGALGGKCYLIGSSVIRQLKVFPRHLCKPPR 2453
Human 2454 PFSALIEDS--------IPTCSPEVGGPENPYLIDPENQNVTLNGPGG-----------CGTRED 2499
Human 2500 CVLSLGRTRTEAHTALSRLRASMWIDRSTRAVSVHFTLYNPPTQLFTSVSLRVEILPTGSLVPSS 2564
Human 2565 LVESFSIFRSDSALQYHLMLPQLVFLALSLIHLCVQLYRMMDKGVLSYWRKPRNWLE-----LSV 2624
Human 2625 VGVSLTYYAVSGHLVTLAGDVTNQFHRGLCRAFMDLTLMASWNQRARWLRGILLFLFTLKCV-YL 2688
Human 2689 PGIQNTMASCSSMMRHSLPSIF--VAGLVGALMLAAL--SHLHRFLLSMWVLPPGTFTDAFPGLL 2749
Human 2750 FHFPRRSQKDCLL----GLSKSDQR-----AMACY--FGILLIVSATLCFGML 2791 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PKD1L1 | XP_016867287.1 | None | |||
pkd1b | XP_021335980.1 | PCC | 25..2314 | CDD:188093 | 249/1306 (19%) |
GPS | 2590..2636 | CDD:321989 | 15/61 (25%) | ||
PLAT_polycystin | 2697..2815 | CDD:238850 | 40/120 (33%) | ||
PKD_channel | 3302..3720 | CDD:332708 | 108/471 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 44 | 1.000 | Domainoid score | I37150 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3599 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |