DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PKD1L1 and pkd1l1

DIOPT Version :9

Sequence 1:XP_016867287.1 Gene:PKD1L1 / 168507 HGNCID:18053 Length:2920 Species:Homo sapiens
Sequence 2:XP_012820943.2 Gene:pkd1l1 / 100492056 XenbaseID:XB-GENE-480146 Length:2682 Species:Xenopus tropicalis


Alignment Length:2502 Identity:898/2502 - (35%)
Similarity:1370/2502 - (54%) Gaps:267/2502 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   567 SVSVYTNGTVFATDTDITFTAVTKETIPLEFEWYFGEDP-PVRTTSRSIKKRLSIPQWYRVMVKA 630
            :||:.||||.|:|:|:|.|.|||.|:.|:.|.|.||:.. |..|.:..|.|:.|||..|.|:|.|
 Frog    25 TVSIVTNGTFFSTETNIIFKAVTSESGPVHFVWNFGDKSLPESTYNSVISKKYSIPNSYNVIVNA 89

Human   631 SNRMSSVVSEPHVIRVQKKIVANRLTSPSSALVNASVAFECWINFGTDVAYLWDFGDGTVSLGSS 695
            |:.:.:||||.:.|.:|||::.|||.:..|.|:|::|.|||.||.||:::|||:|||.|:..|..
 Frog    90 SSPVGTVVSEVYTIFIQKKVIPNRLIARPSVLINSTVTFECRINSGTNISYLWNFGDETIRFGKI 154

Human   696 SSSHVYSREGEFTVEVLAFNNVSASTLRQQLFIVCEPCQPPLVKNMGPGKVQIWRSQPVRLGVTF 760
            :.:|||.||||:||.|..||||||:.|.:|:|:|.|.|.||.||:|||.|:||.|.:.:.|||||
 Frog   155 TDTHVYMREGEYTVNVSIFNNVSAAFLTKQIFVVRELCLPPPVKHMGPQKIQIRRYEQLCLGVTF 219

Human   761 EAAVFCDISQGLSYTWNLMDSEGLPVSLPAAVDTHRQTLILPSHTLEYGNYTALAKVQIEGSVVY 825
            ||.:.|:|||||.|.|:.:.|.|..|.||..::..:|.:.:|...|||.||||:|:|||.|:|||
 Frog   220 EAEIMCNISQGLHYFWSFVKSNGNSVILPNYINDRKQKITVPGFLLEYENYTAVARVQIVGNVVY 284

Human   826 SNYCVGLEVRAQAPVSVISEGTHLFFSRTTSSPIVLRGTQSFDPDDPGATLRYHWECATAGSPAH 890
            |||.|.|||....|||||:.|||....::|.:...|.|:.|||||.|.|:||:||:|......:.
 Frog   285 SNYTVLLEVLPSDPVSVIAGGTHFLIDKSTVTHFKLDGSASFDPDYPEASLRFHWKCIPVSLYSD 349

Human   891 PCFDSSTAHQLDAAAPTVSFEAQWLSDSYDQFLVMLRVSSGGRNSSETRVFLSPYPDSAFRFVHI 955
            .||:::..:.|......:.|....|::.:||||:.|.||:|.|.|...:..||......||.|.|
 Frog   350 SCFNTAALNPLQTDGSIIHFPTALLNEKFDQFLISLTVSNGNRRSPVAQAVLSISSRPNFRDVQI 414

Human   956 SWVSFKDTFVNWNDELSLQAMCEDCSEIPNLSYSWDLFLVNATEKNRIEVPFCRVVGLLGSLGLG 1020
            ..:..|...||||::.|:|.:|.:|.| ..:||||:|:.:|.||....:.|||.|:.:|||    
 Frog   415 ICIECKGYTVNWNEKFSVQVVCTECRE-AEISYSWELYSINTTEVESSDGPFCSVLEILGS---- 474

Human  1021 AISESSQLNLLPTEPGTADPDATTTPFSREPSPVTLGQPATSAPRGTPTEPMTGVYWIPP----- 1080
                                                     |:..|||. |...::..||     
 Frog   475 -----------------------------------------SSLFGTPL-PSVEIFTDPPITQII 497

Human  1081 AGDSAVLGEAPEEGSLDLEPGPQSKGS------------LMTG----RSERSQ------------ 1117
            :||........||..|.|:|.|::..|            :.:|    ||:||:            
 Frog   498 SGDIFDEHRLTEEAYLRLDPCPKTVPSAPIHGIHGLLEEISSGGRPSRSKRSEYTTALRNISHEQ 562

Human  1118 -------------------------------PTHSPDPHLSDFEAYYSDIQEAIPSGGRQPAKDT 1151
                                           |||      ||.|.:...|||.....|.:| :|.
 Frog   563 SGEQTNFNGTYSGFLIGGGEGGADLFNLTEVPTH------SDLEVHCIGIQEGKKGSGGRP-EDP 620

Human  1152 SFPGSGPSLSAEESPGDGDNLVDPSLSAGRAEPVLMIDWPKALLGRAVFQGYSSSGITEQTVTIK 1216
            .....|.:...|.....||.:::||.:|..:....|:||....:.::.|:|:.::.::.|.:|.|
 Frog   621 EGERYGSTRPHENEDQKGDEILNPSKAAAVSPVTSMLDWKTQQISKSTFRGFVTTDLSSQVLTFK 685

Human  1217 PYSLSSGETYVLQVSVASKHGLLGKAQLYLTVNP-APRDMACQVQPHHGLEAHTVFSVFCMSGKP 1280
            |:||..|:.|:|.||:||:...:||:|||.|||. ||| |.|||||:.|:|.:||||:||.|||.
 Frog   686 PFSLKPGKMYMLDVSLASRGNEIGKSQLYFTVNEMAPR-MTCQVQPNEGMELYTVFSIFCTSGKE 749

Human  1281 DFHYEFSYQIGNTS-KHTLYHGRDTQYYFVLPAGEHLDNYKVMVSTEITDGKGSKVQPCTVVVTV 1344
            |.:|:||||:|..| :..||.|||.||||.||||:..|.|:|.:.|:||:..||:.:||.|.|||
 Frog   750 DLYYDFSYQVGRRSARKKLYEGRDIQYYFNLPAGDQTDGYQVTLFTQITNMYGSQTKPCPVNVTV 814

Human  1345 LPRYHGN---DCLGEDLYNSSLKNLSTLQLMGSYTEIRNYITVITRILSRLSKEDKTASCNQWSR 1406
            .|.:..|   |.:.|.||:..|||||.|.||.::.|||||||::|.:|::|..|:........|:
 Frog   815 WPSFGKNTSTDFIAEQLYHHGLKNLSVLLLMENHIEIRNYITLLTVVLNKLYSEETKTPFELQSK 879

Human  1407 IQDALISSVCRLAFVDQEEMIGSVLMLRDLVSFSNKLGFMSAVLILKYTRALLAQGQFS---GPF 1468
            |::||||::|.::|.|::|....|.||.||::::.::...||:|::..|:.:|.:...|   ...
 Frog   880 IRNALISALCSMSFQDEDEFDEIVSMLIDLLNYTKQVTAKSAILVVNATKKILKRSVDSEDHSRI 944

Human  1469 VIDKGVRLELIGLISRVWEVSEQENSKEEVYRHEEGITVISDLLLGCLSLNH-----VSTGQMEF 1528
            .:.:....:::.|||...|||...|.:..:..  :|:.:||||:|..::.|.     :||..::|
 Frog   945 YLQRNSVEKIVSLISYSMEVSIGYNERNFIVL--DGMNIISDLMLEYIAFNKKQHLGLSTNLIDF 1007

Human  1529 RTLLHYNLQSSVQSLGSVQVHLPGDLAGHSPAGAETQ--SPCYISQLILFKKNPYPGSQAPGQI- 1590
            :|..|..||:|:|::||.:|:||...:.|    .||:  :.||||||:.||||||..::...|: 
 Frog  1008 QTSTHMMLQNSIQTIGSTKVYLPQLQSSH----LETKLSNRCYISQLVYFKKNPYLWAEISSQLQ 1068

Human  1591 GGVVGLNLYTCSSRRPINRQWLRKPVMVEFGEEDGLDNRRNKTTFVLLRDKVNLHQFTELSENPQ 1655
            |...|::|:.||:::.||.:.:..|||:||..:...|...||..|.|..||||.|:|..:|.|..
 Frog  1069 GEFAGVSLFNCSNKKKINAREIAAPVMMEFDMKRNHDLELNKNLFSLYWDKVNFHRFHTVSVNRD 1133

Human  1656 ESLQIEIEFSKPVTRAFPVMLLVRFSEKPTPSDFLVKQIYFWDESIVQIYIPAASQKDASVGYLS 1720
            |:|.|.:.||:|..|||||:||||:|:||..|.|.:|:||.|:.:.|||:|||.|.||....||:
 Frog  1134 EALLITVTFSRPNLRAFPVLLLVRYSDKPNTSHFNIKEIYTWEGNSVQIFIPAHSIKDGDNPYLA 1198

Human  1721 LLDADYDRKPPNRYLAKAVNYTVHFQWIRCLFWD-KREWKSERFSPQPGTSPEKVNCSYHRLAAF 1784
            ::||||:|:|.|:||:|.:|||:..||.:||:|| .::|.||...||.||....:.||...|..:
 Frog  1199 IMDADYNRQPRNKYLSKMINYTLETQWTKCLYWDYYKQWNSESCFPQKGTLSTNIICSCKHLGIY 1263

Human  1785 ALLRRKLKASFEVSDISKLQSHPENLLPSIFIMGSVILYGFLVAKSRQVDHHEKKKAGYIFLQEA 1849
            ..||..:..|....:||:.....:|::|..|::.:|.:|..|....:..|.||:||.|.:|||:.
 Frog  1264 TYLRSPVNTSINTEEISQYLLTTKNVIPCTFVLLTVFVYTLLAIYYKFKDRHEEKKNGVVFLQDN 1328

Human  1850 SLPGHQLYAVVIDTGFRAPARLTSKVYIVLCGDNGLSETKELSCPEKPLFERNSRHTFILSAPAQ 1914
            |...||.:|:|:|.|.|:..:.|:|||:||.|::|:|||:||..|:|||||:|||..|::|....
 Frog  1329 SPNDHQHFAIVVDVGLRSRPKSTAKVYVVLHGEDGVSETRELYFPDKPLFEKNSRQAFVMSVSES 1393

Human  1915 LGLLRKIRLWHDSRGPSPGWFISHVMVKELHTGQGWFFPAQCWLSAGRHDGRVERELTCLQGGLG 1979
            ||.:.||.:||::.|.||..::||::||:|.:|..:||.|:|||:....||:||||||....||.
 Frog  1394 LGPIWKIHIWHNNSGYSPSLYLSHIIVKDLQSGHSYFFLAECWLAMDEGDGKVERELTSAVHGLE 1458

Human  1980 FRKLFYCKFTEYLEDFHVWLSVYSRPSSSRYLHTPRLTVSFSLLCVYACLTALVAAGGQEQ---P 2041
            |:||||||.||.|||.|:|.|::||||.|.:.:|.|:||...||..|..|.:::....:||   .
 Frog  1459 FKKLFYCKLTELLEDLHLWGSLFSRPSYSCFTYTQRITVCLVLLLGYMFLNSVLIHWEEEQHSFE 1523

Human  2042 H--LDVSPTLGSFRVGLLCTLLASPGAQLLSLLFRLSKEAPGSARVEPHSPLRGGAQTEAPHGPN 2104
            |  |||||.  |...|...||...|.|.|:|||||.|::...|.        .|..:.:.|...|
 Frog  1524 HGLLDVSPV--SMISGFQSTLALYPLAALISLLFRFSEKKLTSD--------SGEEKLKVPIQTN 1578

Human  2105 SWGRIPDAQEP----------------------RKQ-------PASAILSGSGRAQRKAASDNGT 2140
            |.|...::..|                      :|:       |:...::.|.|:::        
 Frog  1579 SSGDHRNSLSPSDTMFESNLTWQHFQYWAYDAWKKKYERDYFTPSIHSVNCSKRSKK-------- 1635

Human  2141 ACPAPKLQVHGADHSRTSLMGKSHC----CPPHTQAPSSGLEGLMPQWSRALQPWWSSAVWAICG 2201
            ..|:|.:|........:..:.:.:|    |...::.| :|...|.....:.|..|.....|..|.
 Frog  1636 GSPSPTIQSSSGFEDCSQHLAQKNCSHSSCDTCSEFP-TGHRSLFGNQYKVLPQWCIYLAWCFCA 1699

Human  2202 TASLACSLGTGFLAYRFGQEQCVQWLHLLSLSVVCCIFITQPLMVCLMALGFAWKRRADNHFFTE 2266
            ..|:.|:.||..:.:.||..:|:.|.|.:..||:.|.|:.||..:.::|....|:::.....|.|
 Frog  1700 VISIVCAAGTTLIGFSFGPTKCILWAHSVFFSVIFCTFVVQPSTIFIIAFFMTWRKKEIIDLFAE 1764

Human  2267 SLCEATRDLDSELAERSWTRLPFSSSCSIP---DCAGEVEKVLAARQQARHLRWAHPPSKAQLRG 2328
            ::||||:....|.:  ::.::....||  |   |.:.:.||:||||::||:||.|.|||.:||:.
 Frog  1765 TVCEATKYFQRETS--TFEQISTLHSC--PNDLDISTDFEKILAARKRARYLRLARPPSPSQLKV 1825

Human  2329 TRQRMRRESRTRAALRDISMDILMLLLLLCVIYGRFSQDEYSLNQAIRKEFTRNARNCLGGLRNI 2393
            .:.::|:::.|....|:..|..:|:|:.|.:..|:.|.|:|.||||:|.||||:|:.....:|..
 Frog  1826 VKDKIRKKTTTEKTFRECFMHGIMILIFLFITLGKCSNDDYLLNQAVRNEFTRHAKQSFKNIRTE 1890

Human  2394 ADWWDWSLTTLLDGLYPGGTPSARVPGAQPGALGGKCYLIGSSVIRQLKVFPRHLCKPPRPFSAL 2458
            .|||:||...||||||.....:.....::.|.:|||.:|||:.:|::..:.....|......|::
 Frog  1891 DDWWNWSFNVLLDGLYWNKMYNITSAKSKTGPIGGKFFLIGTPIIQKFSLENSSACVTYSFISSI 1955

Human  2459 IEDSIPTCSPEVGGPENPYLIDPENQNVTLNGPGGCGTREDCVLSLGRTRTEAHTALSRLRASMW 2523
            | .|....:.:...|:....::..::....||...|......|::|||:||||::||.|:::..|
 Frog  1956 I-SSYNQANDKPKEPDTENHLEVRDKMHHRNGKVHCYKGRKSVINLGRSRTEAYSALLRIQSQQW 2019

Human  2524 IDRSTRAVSVHFTLYNPPTQLFTSVSLRVEILPTGSLVPSSLVESFSIFRSDSALQYHLMLPQLV 2588
            |:.||.|:.|.||||||||.:||.|.|::|...:|.::.|||:|||.|:...:.|.|..|..:|:
 Frog  2020 INHSTTALHVLFTLYNPPTNVFTVVLLQMEFPASGGVITSSLIESFKIYHIATLLDYITMALKLL 2084

Human  2589 FLALSLIHLCVQLYRMMDKGVLSYWRKPRNWLELSVVGVSLTYYAVSGHLVTLAGDVTNQFHRGL 2653
            ||.|.|:|.|.||..|:..|:.:||::|.||:||.::..||.|||...:...|..|:.::..:..
 Frog  2085 FLGLILLHSCFQLGVMIQTGIRNYWQEPWNWIELGIIASSLCYYACITYTFLLTMDMIDRLQKVF 2149

Human  2654 CRAFMDLTLMASWNQRARWLRGILLFLFTLKCVYLPGIQNTMASCSSMMRHSLPSI---FVAGLV 2715
            .|.|:|.:::|:|.:..|.|.||:.||..:|.:.|..|...||.|.:::..|..|:   .::|::
 Frog  2150 FRIFIDCSILAAWEKWNRSLHGIIFFLMVIKFIKLFRIYKVMAPCLTVLHLSSSSMAFTMISGII 2214

Human  2716 GALMLAALSHLHRFLLSMWVLPPGTFTDAFPGLLFHFPR--RSQKDCLLGL-------------- 2764
            .:|..::|.|:.....|                 |||..  ||.....:.|              
 Frog  2215 FSLAFSSLGHVIVLFNS-----------------FHFSNMIRSLHMLFMNLLGVGDRRLFSFLHL 2262

Human  2765 -SKSDQRAMACYFGILLIVSATLCFGMLRGFLMTLPQK-RKSFQSKSFVRLKDVTAYMWEKVLTF 2827
             :||......|.:.:|.:....|..||:||.|.::.:. .|..::|..:.|.||.::..|||.:.
 Frog  2263 RTKSVPLPATCVYVVLFLFITILWTGMIRGILTSIMKNTSKIHRNKQLITLTDVASHAKEKVYSV 2327

Human  2828 LRLETPKLEEAEMVENHNYYLDEFANLLDELLMKINGLSDSLQLPLLEKTSNNTGEARTEESPLV 2892
            ...:..|..:......:|:||:||.:|:||||.::|.:|:||...|..|.     ...|||    
 Frog  2328 FGRQRMKSTDTTTFPRNNFYLEEFEDLIDELLFRLNAISNSLHHSLPAKL-----HCYTEE---- 2383

Human  2893 DISSYQAAEENTTLSGLSL--YEP---ADIKD 2919
                   |||.:.|...|:  ::|   :|:|:
 Frog  2384 -------AEEVSQLESHSVCCFKPPQESDLKN 2408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PKD1L1XP_016867287.1 None
pkd1l1XP_012820943.2 PCC <36..448 CDD:188093 188/412 (46%)
REJ <671..841 CDD:366875 87/170 (51%)
PLAT 1334..1453 CDD:412108 59/118 (50%)
PKD_channel 1891..2250 CDD:400395 123/376 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 371 1.000 Domainoid score I6761
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H51376
Inparanoid 1 1.050 1503 1.000 Inparanoid score I1391
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10745at32523
OrthoFinder 1 1.000 - - FOG0014039
OrthoInspector 1 1.000 - - oto149287
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11569
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.970

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