DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lepr and sdk

DIOPT Version :9

Sequence 1:XP_036019643.1 Gene:Lepr / 16847 MGIID:104993 Length:1163 Species:Mus musculus
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:1235 Identity:234/1235 - (18%)
Similarity:388/1235 - (31%) Gaps:423/1235 - (34%)


- Green bases have known domain annotations that are detailed below.


Mouse    18 YVIAALNLAYPISPWKFKLFCGPPNTTDDS--------------FLSPAGAPNN--------ASA 60
            |::......|...||.::      |.|:::              ::....|.||        .|.
  Fly   832 YILRYRLFGYNNVPWSYQ------NITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYTEGSK 890

Mouse    61 LKGASEAIVEAKFNSSGIYVPELSKTVFHCCFGNEQGQNCSALTDNTEGKTLASVVKASVFRQLG 125
            :| ..|.:.||.  .:.:.|..::.|...|.:.....|..:.:....:       ::|...|.:.
  Fly   891 IK-TKEGVPEAP--PTNVKVEAINSTAARCRWTPPNPQQINGINQGYK-------IQAWQRRLID 945

Mouse   126 VNW-DIECWMKGDLTLFICHMEPLPKNPFKNYDSKVHLLYDLPEVIDDSPLPPLKDSFQTVQCNC 189
            ..| |||..||           .:|                 |.:||     ||.:  ||    .
  Fly   946 GEWRDIERRMK-----------TVP-----------------PSLID-----PLAE--QT----A 971

Mouse   190 SLRGCECHVPVPRAKLNYALLMYLEITSAGVSFQSPLMSLQPMLVVKPDPPLGLHMEVTDDGNLK 254
            .|.|.|     ...:.|.::|.:.:......|.|..:|::..:    ||...|||.:...|.::|
  Fly   972 ILGGLE-----KFTEYNISVLCFTDPGDGVASSQVAVMTMDDV----PDEVTGLHFDDVSDRSVK 1027

Mouse   255 ISW-----DSQTMAPFPLQYQVKYLENSTIVREAAEIVSATSLLVDSVLPGSSYEVQVRSKRLDG 314
            :.|     .:..:..:.::||||  :....::........|.|.|:.:...:.|..::.:....|
  Fly  1028 VLWAPPRASNGILTGYTVRYQVK--DRPDTLKSFNLTADDTELTVNQLQATTHYWFEIVAWTRVG 1090

Mouse   315 SGVWSDWSSPQVFTTQD-----------------------VVYFPPKILTSVGSNASFHCIYKNE 356
            ||:      |:..|.|.                       |:.|.|    ....|:|. ..:|.|
  Fly  1091 SGI------PKTATIQSGVEPVLPHAPTALALSNIEAFSVVLQFTP----GFDGNSSI-TKWKVE 1144

Mouse   357 NQIISSKQIVWWR------------NLAEKIPEIQYS--------IVSDRVSKVT--FSNLKATR 399
            .|  :::.:.|:.            .:...:|..||.        :.|.:.|:.|  |..::| |
  Fly  1145 GQ--TARNMTWFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQA-R 1206

Mouse   400 PRGKFTYDAVYCCNEQACHHRY-----AELYVIDVNINISCETDGYLTKMTCRWSPSTIQSLVGS 459
            |:.......|...:.|....|:     .|.|......|||.:   .|.|     :|.||: .|..
  Fly  1207 PKHPPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYNISYK---QLVK-----TPGTIK-YVPR 1262

Mouse   460 TVQLRYHRRSLYCPDS----------------------------------PSIHPTSEPKNC--- 487
            :|.:..|..:.:..||                                  ||..|.....|.   
  Fly  1263 SVVIEDHTANSHVLDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAVPSYGPLDVQANATSS 1327

Mouse   488 ---VLQ--------RDG-------FYECVFQ-----------------PIFLLSGYTM------- 510
               |:|        |:|       ||....:                 .:..|..|.:       
  Fly  1328 TTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQVLHKTIPNNATFTTTLTELKKYVVYHVQVLA 1392

Mouse   511 WIRINHSLGSLDSPPTCV--LPDSVVKPLPPSNVKAEITVNTGLLKVSWEKPVFPENN-LQFQIR 572
            :.|:.:  |:|.:||..|  ..|:   |..||||... .|:..:.::.|:.||.|... |.:|:.
  Fly  1393 YTRLGN--GALSTPPIRVQTFEDT---PGVPSNVSFP-DVSLTMARIIWDVPVDPNGKILAYQVT 1451

Mouse   573 YGLSGKEI------------QWKTHEVFDAKSKSASLLVSDLCAVYVVQVRCRRLDGLGYWSNWS 625
            |.|:|..:            .::..|:...|..|.|               |.....||    |.
  Fly  1452 YTLNGSAMLNYSREFPPSDRTFRATELLPGKYYSFS---------------CTAQTRLG----WG 1497

Mouse   626 SPAYTLVMDVKVPMRG-----PEFWRKMDGDVTKKERNVTLLWKPLTKNDSLCSVRRYVVKHRTA 685
            ..|..||.......|.     |:..|..     .:...:|..|.|  ..|....:|.|.|:.| .
  Fly  1498 KIATALVYTTNNRERPQAPSVPQISRSQ-----IQAHQITFSWTP--GRDGFAPLRYYTVEMR-E 1554

Mouse   686 HNGTWS-------------EDVGNRTNLTFLWTEPAHTVTVLAVNSLGASLVNFN--LTFSWPMS 735
            :.|.|.             ..||.|..:|:.:       .:.|.|.||.|..:..  :..:.|.:
  Fly  1555 NEGRWQPLPERVDPSLSSFTAVGLRPYMTYQF-------RIQATNDLGPSAFSRESVIVRTLPAA 1612

Mouse   736 KVSAVESLSAYPLSSSCVILSWTLSPDDYSLLYLVIEWKILNEDDGMKWLRIPSNVKKFYIHDNF 800
            ....|..|...|::::.|.:.|:           .:|..:.|.|......||      .|     
  Fly  1613 PAVGVGGLKVVPITTTSVRVQWS-----------ALETALWNGDASTGGYRI------LY----- 1655

Mouse   801 IPIEKYQFSLYPVFMEGVGKPKIINGFTKDAI---DKQQNDAGLYVIVP--------------II 848
                 .|.|.:|..::...|.. ::|..::::   |.||:.....|::|              :.
  Fly  1656 -----QQLSDFPTALQSTPKTD-VHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPAAVY 1714

Mouse   849 ISSCV-----LLLGTLLISHQRMKKLFWDDVPNPKNCSWAQGLNFQKPETFEHLFTKHAESVIFG 908
            :...|     ..:....||...: :|.|..   ||          |..:..:.|..|....|.:.
  Fly  1715 VGEAVPTGEPRAVDAAPISSTEV-RLLWKP---PK----------QSMQNGDILGYKIYYLVTYS 1765

Mouse   909 PLLLEP-EPISEEISVDTAWKNKDEMV-----PAAMVSLLLTTP---DPESSSICIS--DQCNSA 962
            |..||| ....|||.|.:|......:|     ....:.||...|   .|.|:.|.:.  ....||
  Fly  1766 PQALEPGRKWEEEIEVVSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPRSAPITVKTLPGVPSA 1830

Mouse   963 ----NFSG--SQSTQVTCEDECQRQPS----------VKYATLVSNDKLVETDEEQGFIHSPVSN 1011
                .||.  .||.:||.:     .|.          |.|.|...|:|..:.      :...|||
  Fly  1831 PLHLRFSDITMQSLEVTWD-----PPKFLNGEILGYLVTYETTEENEKFSKQ------VKQKVSN 1884

Mouse  1012  1011
              Fly  1885  1884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeprXP_036019643.1 ObR_Ig 127..232 CDD:408372 22/105 (21%)
FN3 237..329 CDD:238020 20/96 (21%)
Lep_receptor_Ig 328..419 CDD:399379 23/135 (17%)
ObR_Ig 430..532 CDD:408372 31/182 (17%)
FN3 536..626 CDD:238020 23/102 (23%)
FN3 738..819 CDD:214495 14/80 (18%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352
Ig 595..682 CDD:299845
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020 11/67 (16%)
FN3 901..1005 CDD:238020 27/156 (17%)
fn3 1011..1094 CDD:278470 18/90 (20%)
FN3 1108..1202 CDD:238020 16/100 (16%)
FN3 1210..1308 CDD:238020 18/106 (17%)
fn3 1317..1402 CDD:278470 12/86 (14%)
FN3 1415..1507 CDD:238020 26/111 (23%)
FN3 1513..1608 CDD:238020 21/109 (19%)
fn3 1617..1708 CDD:278470 21/118 (18%)
FN3 1722..1823 CDD:238020 26/114 (23%)
FN3 1828..1920 CDD:238020 17/68 (25%)
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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