Sequence 1: | XP_006526786.3 | Gene: | Ldb1 / 16825 | MGIID: | 894762 | Length: | 695 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_726403.2 | Gene: | Chi / 37837 | FlyBaseID: | FBgn0013764 | Length: | 596 | Species: | Drosophila melanogaster |
Alignment Length: | 557 | Identity: | 269/557 - (48%) |
---|---|---|---|
Similarity: | 343/557 - (61%) | Gaps: | 66/557 - (11%) |
- Green bases have known domain annotations that are detailed below.
Mouse 173 TNGSEREGGGGEGGGSAQTRTRTRAHTD-------THSGDAHPRVHT-------QRQLAFLPGFL 223
Mouse 224 PVCSAPDRPLAAGRGGP---------HRAEAGPGRRRGHRGPRAAAAAHARPVPAR---GGHRDS 276
Mouse 277 A-------------GPPAAGDVKMS--VGCACPGCSSKSFKLYSPKEPPNGNAFPPFHPGTMLDR 326
Mouse 327 DVGPTPMYPPTYLE---PGIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDA 388
Mouse 389 MLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVTQ 453
Mouse 454 HGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMH-AQDPQMLDQLSKNIT 517
Mouse 518 RCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQ-PSK 581
Mouse 582 RRKRKMSGGSTMSSGGGNTNNS---NSKKKSPAS-TFALSSQDVMVVGEPTLMGGEFGDEDERLI 642
Mouse 643 TRLENTQFDAANGI--DDEDSFN--NSPALGANSPWN 675 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ldb1 | XP_006526786.3 | LIM_bind | 356..557 | CDD:366819 | 144/201 (72%) |
LID | 620..648 | CDD:375427 | 26/27 (96%) | ||
Chi | NP_726403.2 | LIM_bind | 238..440 | CDD:280051 | 144/201 (72%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167836369 | |
Domainoid | 1 | 1.000 | 241 | 1.000 | Domainoid score | I2236 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 455 | 1.000 | Inparanoid score | I1580 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002757 | |
OrthoInspector | 1 | 1.000 | - | - | otm44085 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105360 | |
Panther | 1 | 1.100 | - | - | O | PTHR10378 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3240 |
SonicParanoid | 1 | 1.000 | - | - | X1842 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.920 |