| Sequence 1: | NP_032511.3 | Gene: | Lamc2 / 16782 | MGIID: | 99913 | Length: | 1193 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
| Alignment Length: | 1448 | Identity: | 340/1448 - (23%) |
|---|---|---|---|
| Similarity: | 543/1448 - (37%) | Gaps: | 433/1448 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 29 DCNGKSRQCVFDQELHRQTGS-GFRC------LNCNDNTAGVHCERCREGFYRHRDRDRCLPCNC 86
Mouse 87 HSKGSLSAGCD-NSGQCRCKPGVTGQRCDRCQP---GFHMLTDAGCTRDQGQLDSKCDCDPAGI- 146
Mouse 147 ---------SGPCD-----------------------------------------SGRCVCKPAV 161
Mouse 162 TGERCDRCRPGYYHLDRANPEGCTQCFCYGHSASCHASADFSVHKI---------TSTFSQD--- 214
Mouse 215 VDGWKA----VQRNGAPAKLHWSQRHRDVFSSARRSDPVYFVAPAKFLGNQQ---VSYGQSLSFD 272
Mouse 273 YRVDRG--GRQPSAYDVIL--EGAGLQIRAPLMAPGKTLPCGITKTYTFRLNEHPSSHWS---PQ 330
Mouse 331 LSYFEYRRLLRNLTALLIRATYGEYS-TGYIDNVTLVSARPVSGAPAPW----VERCVCPAGYKG 390
Mouse 391 QFCQECASGYKRDSARLGPFGA-CVPCNCQG-GGACDPDTG---DCYSGDENPDIECADCPIGFY 450
Mouse 451 NDPHD--PRSCKPCPC-----HNGF--SCSVMPETEEVVCNNCPPGVTGARCELCADGFFGDP-- 504
Mouse 505 FGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADK 569
Mouse 570 CRACNCSPMGSEP-----GECR------GD----------------------------------- 588
Mouse 589 -GSCVCKPGFGGLNCDHAAL----------------------------------------TSCPA 612
Mouse 613 CYNQVKIQMDQFTQQLQSL-EALVSKAQGGGGGGTVPSGELEGRMQ-QAEQALRDILREAQISEG 675
Mouse 676 AMRALGFRLAKARSQENDYKTRLDDLKMTAERIRALGSQHQNRVQDTSRLISQMRLSLAGSEASL 740
Mouse 741 QNTNIHS-SEHYVGPNGFKSLAQEATRLADSHAESANAMKQLARETEDYSKQALSLARKALSGGG 804
Mouse 805 GSGVLDSSVVQGLMGKLEKTKSLSQQLSREGTQADIEADRSYQHSLRLLDSASQLQGVS-DL--S 866
Mouse 867 FQV--EAKRIRQKADSLSNLVTRQTDAFTRVRNNLG----------NWEKETRQLLQTGKDRRQT 919
Mouse 920 SDQ---------LLSRANL-AKNRAQEA---LSMGNATFYEVENILKNLRE-------FDLQV-- 962
Mouse 963 -----EDRKAEA----EEAMKRLSSISQKVADA----SDKTQQAETALGSATADTQRAKNAAREA 1014
Mouse 1015 LEISSEIEQEIGSLNLEANVTADG----ALAMEKG----LATLKSEMREMEGELARKELEFDTDK 1071
Mouse 1072 DTVQLV-----ITEAQQADARA--------------TSAGVTIQDTLNTLDGILHLIDQPGSVD- 1116
Mouse 1117 ----------EEGMMLLEQGLFQAKTQIN------SRLRPLMSDLEERVRRQRNHLHLLETSIDG 1165
Mouse 1166 ILADVKNLENIRDNLPPG 1183 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lamc2 | NP_032511.3 | Laminin_EGF | 28..86 | CDD:365839 | 18/63 (29%) |
| EGF_Lam | 83..127 | CDD:238012 | 18/47 (38%) | ||
| Laminin_EGF | 139..184 | CDD:365839 | 21/95 (22%) | ||
| Laminin_B | 245..370 | CDD:383018 | 36/135 (27%) | ||
| EGF_Lam | 461..509 | CDD:238012 | 22/56 (39%) | ||
| Laminin_EGF | 517..564 | CDD:365839 | 20/46 (43%) | ||
| EGF_Lam | 572..>604 | CDD:238012 | 14/78 (18%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 586..588 | 0/7 (0%) | |||
| SMC_prok_B | <614..1192 | CDD:274008 | 129/667 (19%) | ||
| LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | |
| EGF_Lam | 272..>314 | CDD:238012 | |||
| EGF_Lam | 332..389 | CDD:238012 | |||
| EGF_Lam | 402..443 | CDD:238012 | |||
| EGF_Lam | 448..491 | CDD:238012 | |||
| Laminin_EGF | 495..543 | CDD:278482 | |||
| Laminin_EGF | 541..589 | CDD:278482 | |||
| Laminin_EGF | 587..634 | CDD:278482 | |||
| EGF_Lam | 631..673 | CDD:238012 | |||
| Laminin_EGF | 677..729 | CDD:278482 | |||
| Laminin_EGF | 732..782 | CDD:278482 | |||
| EGF_Lam | 785..828 | CDD:238012 | |||
| CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
| Laminin_EGF | 1375..1423 | CDD:278482 | 16/55 (29%) | ||
| EGF_Lam | 1420..1457 | CDD:238012 | 15/40 (38%) | ||
| Laminin_EGF | 1466..1516 | CDD:278482 | 7/49 (14%) | ||
| Laminin_EGF | 1514..1562 | CDD:278482 | 14/47 (30%) | ||
| LamB | 1632..1760 | CDD:214597 | 36/135 (27%) | ||
| Laminin_EGF | <1775..1801 | CDD:278482 | 14/27 (52%) | ||
| EGF_Lam | 1808..1851 | CDD:238012 | 15/44 (34%) | ||
| EGF_Lam | 1859..1907 | CDD:214543 | 20/48 (42%) | ||
| EGF_Lam | 1916..1968 | CDD:238012 | 20/54 (37%) | ||
| EGF_Lam | 1969..2015 | CDD:238012 | 7/45 (16%) | ||
| EGF_Lam | 2016..>2054 | CDD:238012 | 9/37 (24%) | ||
| EGF_Lam | 2063..>2097 | CDD:238012 | 1/33 (3%) | ||
| Laminin_I | 2129..2385 | CDD:283627 | 59/321 (18%) | ||
| Tar | 2278..2662 | CDD:223910 | 82/393 (21%) | ||
| Laminin_II | 2566..2700 | CDD:283628 | 23/110 (21%) | ||
| LamG | 2674..2843 | CDD:238058 | 1/1 (100%) | ||
| LamG | 2878..3029 | CDD:238058 | |||
| LamG | 3078..3205 | CDD:214598 | |||
| LamG | 3349..3512 | CDD:238058 | |||
| LamG | 3535..3689 | CDD:238058 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||